Evidence map›Paper›PMID 35839216›Full record

ArticlePloS one2022

Hepatitis C virus transmission cluster among injection drug users in Pakistan.

Kashif Iqbal Sahibzada, Lilia Ganova-Raeva, Zoya Dimitrova, Sumathi Ramachandran, Yulin Lin, Garrett Longmire, Leonard Arthur, Guo-Liang Xia, Yury Khudyakov, Idrees Khan and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Kashif Iqbal SahibzadaSchool of Biochemistry and Biotechnology, University of the Punjab, Lahore, Pakistan.ORCID 0000-0003-3169-6605
Lilia Ganova-RaevaDivision of Viral Hepatitis, Center of Disease Control and Prevention, Molecular Epidemiology and Bioinformatics, Atlanta, GA, United States of America.ORCID 0000-0001-6698-256X
Zoya DimitrovaDivision of Viral Hepatitis, Center of Disease Control and Prevention, Molecular Epidemiology and Bioinformatics, Atlanta, GA, United States of America.
Sumathi RamachandranDivision of Viral Hepatitis, Center of Disease Control and Prevention, Molecular Epidemiology and Bioinformatics, Atlanta, GA, United States of America.
Yulin LinDivision of Viral Hepatitis, Center of Disease Control and Prevention, Molecular Epidemiology and Bioinformatics, Atlanta, GA, United States of America.
Garrett LongmireDivision of Viral Hepatitis, Center of Disease Control and Prevention, Molecular Epidemiology and Bioinformatics, Atlanta, GA, United States of America.
Leonard ArthurDivision of Viral Hepatitis, Center of Disease Control and Prevention, Molecular Epidemiology and Bioinformatics, Atlanta, GA, United States of America.
Guo-Liang XiaDivision of Viral Hepatitis, Center of Disease Control and Prevention, Molecular Epidemiology and Bioinformatics, Atlanta, GA, United States of America.
Yury KhudyakovDivision of Viral Hepatitis, Center of Disease Control and Prevention, Molecular Epidemiology and Bioinformatics, Atlanta, GA, United States of America.
Idrees KhanUniversity of Peshawar, Peshawar, KPK, Pakistan.
Saima SadafSchool of Biochemistry and Biotechnology, University of the Punjab, Lahore, Pakistan.
Centers for Disease Control and Prevention · USUniversity of Peshawar · PKUniversity of the Punjab · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis C virus (HCV) infections are public health problem across the globe, particularly in developing countries. Pakistan has the second highest prevalence of HCV infection worldwide. Limited data exist from Pakistan about persons who inject drugs (PWID) and are at significant risk of exposure to HCV infection and transmission. Serum specimens (n = 110) collected from PWID residing in four provinces were tested for molecular markers of HCV infection. Next generation sequencing (NGS) of the hypervariable region (HVR1) of HCV and Global Hepatitis Outbreak and Surveillance Technology (GHOST) were used to determine HCV genotype, genetic heterogeneity, and construct transmission networks. Among tested specimens, 47.3% were found anti-HCV positive and 34.6% were HCV RNA-positive and belonged to four genotypes, with 3a most prevalent followed by 1a, 1b and 4a. Variants sampled from five cases formed phylogenetic cluster and a transmission network. One case harbored infection with two different genotypes. High prevalence of infections and presence of various genotypes indicate frequent introduction and transmission of HCV among PWID in Pakistan. Identification of a transmission cluster across three provinces, involving 20% of all cases, suggests the existence of a countrywide transmission network among PWIDs. Understanding the structure of this network should assist in devising effective public health strategies to eliminate HCV infection in Pakistan.

Indexed as

Drug UsersHepatitis CSubstance Abuse, IntravenousGenotypeHepacivirusHumansPakistanPhylogenyPrevalence

Identifiers

PMID35839216
PMCPMC9286280
OpenAlexW4285493645

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.