Evidence map›Paper›PMID 35838775›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2022

Age-associated changes in gene expression in the anterior pituitary glands of female Japanese black cattle.

Dimas Arya Abdillah, Onalenna Kereilwe, Yoichi Mizukami, Kenji Watanabe, Hiroya Kadokawa

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Dimas Arya AbdillahJoint Faculty of Veterinary Medicine, Yamaguchi University, Yoshida 1677-1 Yamaguchi-ken, Yamaguchi-shi, 753-8515, Japan.
Onalenna KereilweJoint Faculty of Veterinary Medicine, Yamaguchi University, Yoshida 1677-1 Yamaguchi-ken, Yamaguchi-shi, 753-8515, Japan.
Yoichi MizukamiCenter for Gene Research, Yamaguchi University, Minami Kogushi 1-1-1, Ube-shi, Yamaguchi-ken, 755-8505, Japan.
Kenji WatanabeCenter for Gene Research, Yamaguchi University, Minami Kogushi 1-1-1, Ube-shi, Yamaguchi-ken, 755-8505, Japan.
Hiroya KadokawaJoint Faculty of Veterinary Medicine, Yamaguchi University, Yoshida 1677-1 Yamaguchi-ken, Yamaguchi-shi, 753-8515, Japan. hiroya@yamaguchi-u.ac.jp.ORCID 0000-0002-8454-9601
Yamaguchi University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proper functioning of the anterior pituitary (AP) gland is imperative, however, is suppressed by aging via unclear mechanisms. Therefore, we identified differentially expressed genes (DEGs) in the AP glands of Japanese Black young heifers (approximately 22 months old) compared to old cows (approximately 120 months old) via deep sequencing of the transcriptome (RNA-seq) to characterize potentially important pathways. The young and old AP glands expressed 20,171 annotated genes. Of the total transcripts per million, approximately 41.6% and 35.5% were the sum of seven AP hormone genes in young and old AP glands, respectively, with difference observed in the sum between the young and old AP glands (P < 0.05). Moreover, we identified 48 downregulated genes and 218 upregulated genes in old compared to young AP glands (P < 0.01, fold change > 120%). The DEGs included 1 cytokine (AIMP1), 3 growth factors (NRG2, PTN, and TGFB1), 1 receptor-associated protein gene (AGTRAP), and 10 receptor genes, including PRLHR and two orphan G-protein-coupled receptors (GPR156 and GPR176). Metascape analysis of the DEGs revealed "Peptide metabolic process," "Regulation of hormone levels," and "Peptide hormone processing" as enriched pathways. Furthermore, Ingenuity Pathway analysis of the DEGs revealed (1) a network of 24 genes (including GPR156 and PRLHR) named "Neurological disease, organismal injury and abnormalities, and psychological disorders", and (2) two canonical pathways (P < 0.01), namely "Huntington's disease signaling", and "AMPK signaling". Thus, the findings of the current study revealed relevant DEGs, while identifying important pathways that occur during aging in AP glands of female cattle.

Indexed as

Pituitary Gland, AnteriorTranscriptomeAgingAnimalsCattleFemaleGene Expression ProfilingHormonesSignal TransductionHormones

Identifiers

PMID35838775
OpenAlexW4285589449

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.