Evidence map›Paper›PMID 35837755›Full record

ArticleInternational journal of cancer2022

An international report on bacterial communities in esophageal squamous cell carcinoma.

Jason Nomburg, Susan Bullman, Dariush Nasrollahzadeh, Eric A Collisson, Behnoush Abedi-Ardekani, Larry O Akoko, Joshua R Atkins, Geoffrey C Buckle, Satish Gopal, Nan Hu and 26 more

Open access · greenAbstract read
In one paragraph

Article in International journal of cancer, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Esophageal cancer: from pathogenesis to precision therapies.Signal transduction and targeted therapy · 2026
    Review
  4. Article
  5. Article
  6. IntratumoralScience advances · 2026
    Article
  7. Article
  8. The multi-kingdom cancer microbiome.Nature microbiology · 2025
    Review
  9. Oral microbes and gastrointestinal cancers: new strategies and insights.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2025
    Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. The role of oral microbiota in cancer.Frontiers in microbiology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors at 16 institutions in 8 countries.

Jason NomburgDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.ORCID 0000-0001-7807-8658
Susan BullmanFred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Dariush NasrollahzadehDigestive Oncology Research Center, Digestive Disease Research Institute, Tehran University of Medical Sciences, Shariati Hospital, Tehran, Iran.
Eric A CollissonHelen Diller Family Comprehensive Cancer Center, University of California, San Francisco (UCSF), San Francisco, California, USA.
Behnoush Abedi-ArdekaniInternational Agency for Research on Cancer (IARC), Genomic Epidemiology Branch, Lyon, France.
Larry O AkokoMuhimbili University of Health and Allied Sciences, Dar es Salaam, Tanzania.
Joshua R AtkinsInternational Agency for Research on Cancer (IARC), Genomic Epidemiology Branch, Lyon, France.
Geoffrey C BuckleHelen Diller Family Comprehensive Cancer Center, University of California, San Francisco (UCSF), San Francisco, California, USA.ORCID 0000-0001-7721-0397
Satish GopalUniversity of North Carolina (UNC), Chapel Hill, North Carolina, USA.
Nan HuDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Bongani KaimilaUNC Project, Lilongwe, Malawi.
Masoud KhoshniaDigestive Oncology Research Center, Digestive Disease Research Institute, Tehran University of Medical Sciences, Shariati Hospital, Tehran, Iran.
Reza MalekzadehDigestive Oncology Research Center, Digestive Disease Research Institute, Tehran University of Medical Sciences, Shariati Hospital, Tehran, Iran.ORCID 0000-0002-9820-6335
Diana MenyaSchool of Public Health, Moi University, Eldoret, Kenya.
Blandina T MmbagaKilimanjaro Clinical Research Institute, Kilimanjaro Christian Medical Center, Moshi, Tanzania.
Sarah MoodyThe Cancer, Ageing and Somatic Mutation Programme, Wellcome Trust Sanger Institute, Cambridgeshire, UK.
Gift MulimaKamuzu Central Hospital, Lilongwe, Malawi.
Beatrice P MushiMuhimbili University of Health and Allied Sciences, Dar es Salaam, Tanzania.
Julius MwaiselageOcean Road Cancer Institute, Dar es Salaam, Tanzania.
Ally MwangaMuhimbili University of Health and Allied Sciences, Dar es Salaam, Tanzania.
Yulia NewtonNantOmics/NantHealth, Inc., El Segundo, California, USA.
Dianna L NgHelen Diller Family Comprehensive Cancer Center, University of California, San Francisco (UCSF), San Francisco, California, USA.
Amie RadenbaughNantOmics/NantHealth, Inc., El Segundo, California, USA.
Deogratias S RwakatemaKilimanjaro Clinical Research Institute, Kilimanjaro Christian Medical Center, Moshi, Tanzania.
Msiba SelekwaMuhimbili University of Health and Allied Sciences, Dar es Salaam, Tanzania.
Joachim SchüzInternational Agency for Research on Cancer (IARC/WHO), Environment and Lifestyle Epidemiology Branch, Lyon, France.ORCID 0000-0001-9687-2134
Philip R TaylorDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Charles VaskeNantOmics/NantHealth, Inc., El Segundo, California, USA.
Alisa GoldsteinDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Michael R StrattonThe Cancer, Ageing and Somatic Mutation Programme, Wellcome Trust Sanger Institute, Cambridgeshire, UK.
Valerie McCormackInternational Agency for Research on Cancer (IARC/WHO), Environment and Lifestyle Epidemiology Branch, Lyon, France.ORCID 0000-0001-7397-3442
Paul BrennanInternational Agency for Research on Cancer (IARC), Genomic Epidemiology Branch, Lyon, France.ORCID 0000-0002-0518-8714
James A DeCaprioDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.
Matthew MeyersonDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.
Elia J MmbagaMuhimbili University of Health and Allied Sciences, Dar es Salaam, Tanzania.ORCID 0000-0003-3768-0225
Katherine Van LoonHelen Diller Family Comprehensive Cancer Center, University of California, San Francisco (UCSF), San Francisco, California, USA.ORCID 0000-0002-9705-4114
Centre international de recherche sur le cancer · FRMuhimbili University of Health and Allied Sciences · TZUniversity of California, San Francisco · USImmunityBio (United States) · USNational Cancer Institute · USShariati Hospital · IRBroad Institute · USKilimanjaro Christian Medical Centre · TZWellcome Sanger Institute · GBBrigham and Women's Hospital · USFred Hutch Cancer Center · USKamuzu Central Hospital · MWLilongwe University of Agriculture and Natural Resources · MWMoi University · KEOcean Road Cancer Institute · TZUniversity of North Carolina at Chapel Hill · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
Translational InformaticsP30CA082103 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Kate Taylor Shumate · 1999 to 2026
$209.7M
PROJECT 4: Interrogating PP2A Signaling in Human CancersP01CA203655 · NCI · DANA-FARBER CANCER INST · PI DECAPRIO, JAMES A. · 2017 to 2021
$8.0M
Esophageal cancer genetic projectZIACP010224 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI GOLDSTEIN, ALISA · 2012 to 2025
$7.3M
The DREAM B-Myb-MuvB complex controls sensitivity to DNA replication activators and inhibitorsR35CA232128 · NCI · DANA-FARBER CANCER INST · PI DECAPRIO, JAMES A. · 2019 to 2025
$7.2M
Visualization hub for genomics data exploration and translational discoveryU24CA210974 · NCI · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI COLLISSON, ERIC, HAUSSLER, DAVID H · 2016 to 2020
$4.2M
Genomics and Functional Characterization of NF1-mutated Lung CancerR01CA227807 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COLLISSON, ERIC · 2018 to 2022
$2.8M
The structural and functional basis of MET exon 14 activation and acquired drug resistanceR01CA230263 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COLLISSON, ERIC, JURA, NATALIA · 2019 to 2023
$2.0M
Optimizing Treatment Approaches to Lung Cancers Harboring MET Exon 14 mutationsR01CA239604 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COLLISSON, ERIC · 2019 to 2023
$2.0M
Tailoring Therapy to Pancreatic Cancer SubtypesR01CA222862 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COLLISSON, ERIC · 2018 to 2022
$1.8M
The role of Fusobacterium in colorectal cancer treatment, tumor ecology and chemotherapeutic efficacyR00CA229984 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BULLMAN, SUSAN · 2019 to 2021
$718k
Esophageal cancer in West KenyaR21CA191965 · NCI · INTERNATIONAL AGENCY FOR RES ON CANCER · PI MCCORMACK, VALERIE · 2015 to 2016
$256k
Cancer Research UK C98/A24032NCI NIH HHS P01 CA203655NCI NIH HHS P30 CA015704NCI NIH HHS P30 CA082103NCI NIH HHS R00 CA229984NCI NIH HHS R01 CA222862NCI NIH HHS R01 CA227807NCI NIH HHS R01 CA230263NCI NIH HHS R01 CA239604NCI NIH HHS R21 CA191965NCI NIH HHS R35 CA232128NCI NIH HHS U24 CA210974World Health Organization 001
6 · The paper itself

Abstract

The incidence of esophageal squamous cell carcinoma (ESCC) is disproportionately high in the eastern corridor of Africa and parts of Asia. Emerging research has identified a potential association between poor oral health and ESCC. One possible link between poor oral health and ESCC involves the alteration of the microbiome. We performed an integrated analysis of four independent sequencing efforts of ESCC tumors from patients from high- and low-incidence regions of the world. Using whole genome sequencing (WGS) and RNA sequencing (RNAseq) of ESCC tumors from 61 patients in Tanzania, we identified a community of bacteria, including members of the genera Fusobacterium, Selenomonas, Prevotella, Streptococcus, Porphyromonas, Veillonella and Campylobacter, present at high abundance in ESCC tumors. We then characterized the microbiome of 238 ESCC tumor specimens collected in two additional independent sequencing efforts consisting of patients from other high-ESCC incidence regions (Tanzania, Malawi, Kenya, Iran, China). This analysis revealed similar ESCC-associated bacterial communities in these cancers. Because these genera are traditionally considered members of the oral microbiota, we next explored whether there was a relationship between the synchronous saliva and tumor microbiomes of ESCC patients in Tanzania. Comparative analyses revealed that paired saliva and tumor microbiomes were significantly similar with a specific enrichment of Fusobacterium and Prevotella in the tumor microbiome. Together, these data indicate that cancer-associated oral bacteria are associated with ESCC tumors at the time of diagnosis and support a model in which oral bacteria are present in high abundance in both saliva and tumors of some ESCC patients.

Indexed as

Esophageal NeoplasmsEsophageal Squamous Cell CarcinomaMicrobiotaBacteriaHumansKenyaAfricaesophageal canceresophageal squamous cell carcinomaFusobacteriummicrobiome

Identifiers

PMID35837755
PMCPMC11100422
OpenAlexW4285590867

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.