Evidence map›Paper›PMID 35837736›Full record

ArticleJournal of chemical theory and computation2022

A Fast and Interpretable Deep Learning Approach for Accurate Electrostatics-Driven p

Pedro B P S Reis, Marco Bertolini, Floriane Montanari, Walter Rocchia, Miguel Machuqueiro, Djork-Arné Clevert

Abstract read
In one paragraph

Article in Journal of chemical theory and computation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. RSC chemical biology · 2026
    Article
  2. Protein Electrostatic Properties are Finetuned Through Evolution.bioRxiv : the preprint server for biology · 2026
    Article
  3. Graph-Based Deep Learning Models for Predicting pJournal of chemical information and modeling · 2026
    Article
  4. TrIPP: a trajectory iterative pKa predictor.Bioinformatics (Oxford, England) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Adding the AMBER 14SB Force Field to the Stochastic Titration CpHMD Method.Journal of chemical theory and computation · 2025
    Article
  11. Article
  12. KaMLs for Predicting Protein pJournal of chemical theory and computation · 2025
    Article
  13. KaMLs for Predicting Protein pbioRxiv : the preprint server for biology · 2025
    Article
  14. Comparative Analysis of pACS omega · 2025
    Article
  15. Article
  16. Article
  17. Kinetic principles of chemical cross-link formation for protein-protein interactions.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  18. Article
  19. Article
  20. Comparative Performance of High-Throughput Methods for Protein pJournal of chemical information and modeling · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Pedro B P S ReisMachine Learning Research, Bayer A.G., Berlin 13353, Germany.ORCID 0000-0003-3563-6239
Marco BertoliniMachine Learning Research, Bayer A.G., Berlin 13353, Germany.
Floriane MontanariMachine Learning Research, Bayer A.G., Berlin 13353, Germany.ORCID 0000-0002-4676-6170
Walter RocchiaCONCEPT Lab, Istituto Italiano di Tecnologia (IIT), Via Melen 83, B Block, Genoa 16152, Italy.ORCID 0000-0003-2480-7151
Miguel MachuqueiroBiosystems and Integrative Sciences Institute (BioISI), Faculty of Sciences, University of Lisboa, Campo Grande, Lisboa 1749-016, Portugal.ORCID 0000-0001-6923-8744
Djork-Arné ClevertMachine Learning Research, Bayer A.G., Berlin 13353, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Existing computational methods for estimating p

Indexed as

Deep LearningMolecular Docking SimulationMolecular Dynamics SimulationProteinsStatic ElectricityProteins

Identifiers

PMID35837736
PMCPMC9369009

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.