Evidence map›Paper›PMID 35836524›Full record

ArticleTranslational cancer research2022

Construction and validation of a pyroptosis-related gene signature in hepatocellular carcinoma based on RNA sequencing.

Jiaming He, Jianhua Ran, Jing Li, Dilong Chen

Open access · diamondAbstract read
In one paragraph

Article in Translational cancer research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jiaming HeLaboratory of Stem Cells and Tissue Engineering, Department of Histology and Embryology, Chongqing Medical University, Chongqing, China.
Jianhua RanNeuroscience Research Center, Chongqing Medical University, Chongqing, China.
Jing LiLaboratory of Stem Cells and Tissue Engineering, Department of Histology and Embryology, Chongqing Medical University, Chongqing, China.
Dilong ChenLaboratory of Stem Cells and Tissue Engineering, Department of Histology and Embryology, Chongqing Medical University, Chongqing, China.
Chongqing Medical University · CNChongqing Three Gorges University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: To establish a pyroptosis-related gene (PRG) signature that could be utilized to predict hepatocellular carcinoma (HCC) survival and clinical features. Methods: The Cancer Genome Atlas (TCGA) database was utilized to identify differentially expressed PRGs. Univariate Cox and least absolute shrinkage and selection operator (LASSO) Cox regression analyses were utilized to establish the prognostic signature. The signature was verified in the International Cancer Genome Consortium cohort (ID: LIHC-US). Based on the medium-risk score, HCC samples were classified into high- or low-risk subgroups. For signature accuracy prediction, we utilized receiver operating characteristic (ROC) analysis and the Kaplan-Meier estimate (K-M). Molecular and immunological aspects were also reviewed using single-sample gene set enrichment analysis (ssGSEA). Finally, quantitative real-time PCR (qRT-PCR) was utilized to verify the expression of hub genes in vitro. Results: On basis of the 33 PRGs, five PRGs ( Conclusions: The signature could precisely predict survival outcomes and reveal immune microenvironment composition, as well as strengthen the argument for more credible clinical and functional research in HCC patients.

Indexed as

bioinformaticsHepatocellular carcinoma (HCC)prognosispyroptosis

Identifiers

PMID35836524
PMCPMC9273708
OpenAlexW4285557961

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.