Evidence map›Paper›PMID 35836198›Full record

ArticleJournal of translational medicine2022

Molecular mimicry between tumor associated antigens and microbiota-derived epitopes.

Concetta Ragone, Carmen Manolio, Angela Mauriello, Beatrice Cavalluzzo, Franco M Buonaguro, Maria Lina Tornesello, Maria Tagliamonte, Luigi Buonaguro

Open access · goldAbstract read
In one paragraph

Article in Journal of translational medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Exploiting bacteria for cancer immunotherapy.Nature reviews. Clinical oncology · 2024
    Review
  16. Cross-reactive CD8Journal of experimental & clinical cancer research : CR · 2024
    Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Concetta Ragone *Lab of Innovative Immunological Models, Istituto Nazionale per lo Studio e la Cura dei Tumori - IRCCS, "Fondazione Pascale", Via Mariano Semmola, 52, 80131, Naples, Italy.
Carmen Manolio *Lab of Innovative Immunological Models, Istituto Nazionale per lo Studio e la Cura dei Tumori - IRCCS, "Fondazione Pascale", Via Mariano Semmola, 52, 80131, Naples, Italy.
Angela MaurielloLab of Innovative Immunological Models, Istituto Nazionale per lo Studio e la Cura dei Tumori - IRCCS, "Fondazione Pascale", Via Mariano Semmola, 52, 80131, Naples, Italy.
Beatrice CavalluzzoLab of Innovative Immunological Models, Istituto Nazionale per lo Studio e la Cura dei Tumori - IRCCS, "Fondazione Pascale", Via Mariano Semmola, 52, 80131, Naples, Italy.
Franco M BuonaguroMolecular Biology and Viral Oncogenesis Unit, Istituto Nazionale per lo Studio e la Cura dei Tumori - IRCCS "Fond G. Pascale", Via Mariano Semmola, 52, 80131, Naples, Italy.
Maria Lina TorneselloMolecular Biology and Viral Oncogenesis Unit, Istituto Nazionale per lo Studio e la Cura dei Tumori - IRCCS "Fond G. Pascale", Via Mariano Semmola, 52, 80131, Naples, Italy.
Maria Tagliamonte *Lab of Innovative Immunological Models, Istituto Nazionale per lo Studio e la Cura dei Tumori - IRCCS, "Fondazione Pascale", Via Mariano Semmola, 52, 80131, Naples, Italy. m.tagliamonte@istitutotumori.na.it.
Luigi Buonaguro *Lab of Innovative Immunological Models, Istituto Nazionale per lo Studio e la Cura dei Tumori - IRCCS, "Fondazione Pascale", Via Mariano Semmola, 52, 80131, Naples, Italy. l.buonaguro@istitutotumori.na.it.ORCID 0000-0002-6380-7114
Istituto Nazionale Tumori IRCCS "Fondazione G. Pascale" · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe gut microbiota profile is unique for each individual and are composed by different bacteria species according to individual birth-to-infant transitions. In the last years, the local and systemic effects of microbiota on cancer onset, progression and response to treatments, such as immunotherapies, has been extensively described. Here we offer a new perspective, proposing a role for the microbiota based on the molecular mimicry of tumor associated antigens by microbiome-associated antigens.

methodsIn the present study we looked for homology between published TAAs and non-self microbiota-derived epitopes. Blast search for sequence homology was combined with extensive bioinformatics analyses.

resultsSeveral evidences for homology between TAAs and microbiota-derived antigens have been found. Strikingly, three cases of 100% homology between the paired sequences has been identified. The predicted average affinity to HLA molecules of microbiota-derived antigens is very high (< 100 nM). The structural conformation of the microbiota-derived epitopes is, in general, highly similar to the corresponding TAA. In some cases, it is identical and contact areas with both HLA and TCR chains are indistinguishable. Moreover, the spatial conformation of TCR-facing residues can be identical in paired TAA and microbiota-derived epitopes, with exactly the same values of planar as well as dihedral angles.

conclusionsThe data reported in the present study show for the first time the high homology in the linear sequence as well as in structure and conformation between TAAs and peptides derived from microbiota species of the Firmicutes and the Bacteroidetes phyla, which together account for 90% of gut microbiota. Cross-reacting CD8

Indexed as

MicrobiotaNeoplasmsAntigens, NeoplasmEpitopesEpitopes, T-LymphocyteHumansMolecular MimicryReceptors, Antigen, T-CellAntigens, NeoplasmEpitopesEpitopes, T-LymphocyteReceptors, Antigen, T-CellCross-reacting T cellsMicrobiota-derived antigensMolecular mimicryTumor associated antigens

Identifiers

PMID35836198
PMCPMC9281086
OpenAlexW4285386991

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.