Evidence map›Paper›PMID 35833994›Full record

ArticleCellular and molecular life sciences : CMLS2022

Molecular crowding facilitates bundling of IMPDH polymers and cytoophidium formation.

Chia-Chun Chang, Min Peng, Jiale Zhong, Ziheng Zhang, Gerson Dierley Keppeke, Li-Ying Sung, Ji-Long Liu

Abstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Differential Cytoophidium Assembly betweenInternational journal of molecular sciences · 2024
    Article
  8. The IMPDH cytoophidium couples metabolism and fetal development in mice.Cellular and molecular life sciences : CMLS · 2024
    Article
  9. Dynamic Cytoophidia during Late-StageInternational journal of molecular sciences · 2024
    Article
  10. Cytoophidia Influence Cell Cycle and Size inInternational journal of molecular sciences · 2024
    Article
  11. A journey into the regulatory secrets of theFrontiers in pharmacology · 2024
    Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Super-Resolution Imaging Reveals Dynamic Reticular Cytoophidia.International journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chia-Chun ChangSchool of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China.
Min PengInstitute of Biotechnology, National Taiwan University, Taipei, 106, Taiwan.
Jiale ZhongSchool of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China.
Ziheng ZhangSchool of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China.
Gerson Dierley KeppekeSchool of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China.
Li-Ying SungInstitute of Biotechnology, National Taiwan University, Taipei, 106, Taiwan.
Ji-Long LiuSchool of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China. liujl3@shanghaitech.edu.cn.ORCID http://orcid.org/0000-0002-4834-8554

Funding

Medical Research Council MC_U137788471Medical Research Council MC_UU_12021/3Ministry of Science and Technology of the People's Republic of China 2021YFA0804701-4National Natural Science Foundation of China 31771490Shanghai Science and Technology Commission 20JC1410500
6 · The paper itself

Abstract

The cytoophidium is a unique type of membraneless compartment comprising of filamentous protein polymers. Inosine monophosphate dehydrogenase (IMPDH) catalyzes the rate-limiting step of de novo GTP biosynthesis and plays critical roles in active cell metabolism. However, the molecular regulation of cytoophidium formation is poorly understood. Here we show that human IMPDH2 polymers bundle up to form cytoophidium-like aggregates in vitro when macromolecular crowders are present. The self-association of IMPDH polymers is suggested to rely on electrostatic interactions. In cells, the increase of molecular crowding with hyperosmotic medium induces cytoophidia, while the decrease of that by the inhibition of RNA synthesis perturbs cytoophidium assembly. In addition to IMPDH, CTPS and PRPS cytoophidium could be also induced by hyperosmolality, suggesting a universal phenomenon of cytoophidium-forming proteins. Finally, our results indicate that the cytoophidium can prolong the half-life of IMPDH, which is proposed to be one of conserved functions of this subcellular compartment.

Indexed as

IMP DehydrogenaseIntracellular SpacePolymersCell CompartmentationHumansIMP DehydrogenaseIMPDH2 protein, humanPolymersCellular compartmentalizationCytoophidiumIMPDHMembraneless organelleMolecular crowding

Identifiers

PMID35833994
PMCPMC11072341

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.