Evidence map›Paper›PMID 35822827›Full record

ArticleBiotech (Basel (Switzerland))2020

Retrotransposons and the Evolution of Genome Size in

T H Noel Ellis, Alexander V Vershinin

Open access · goldAbstract read
In one paragraph

Article in Biotech (Basel (Switzerland)), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

T H Noel EllisJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich NR4 7UH, UK.ORCID 0000-0001-6726-9950
Alexander V VershininInstitute of Molecular and Cellular Biology, Acad. Lavrentiev Ave. 8/2, 630090 Novosibirsk, Russia.ORCID 0000-0001-5116-1806
John Innes Centre · GBNovosibirsk State University · RU

Funding

Biotechnology and Biological Sciences Research Council BB/R020604/1Russian Fundamental Scientific Research Program project 0310-2019-0003
6 · The paper itself

Abstract

Here we investigate the plant population genetics of retrotransposon insertion sites in pea to find out whether genetic drift and the neutral theory of molecular evolution can account for their abundance in the pea genome. (1) We asked whether two contrasting types of pea LTR-containing retrotransposons have the frequency and age distributions consistent with the behavior of neutral alleles and whether these parameters can explain the rate of change of genome size in legumes. (2) We used the recently assembled v1a pea genome sequence to obtain data on LTR-LTR divergence from which their age can be estimated. We coupled these data to prior information on the distribution of insertion site alleles. (3) We found that the age and frequency distribution data are consistent with the neutral theory. (4) We concluded that demographic processes are the underlying cause of genome size variation in legumes.

Indexed as

genome sizelegumespearetrotransposons

Identifiers

PMID35822827
PMCPMC9258317
OpenAlexW3110414861

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.