Evidence map›Paper›PMID 35822049›Full record

ArticleFrontiers in aging2021

Defining the Dynamic Regulation of O-GlcNAc Proteome in the Mouse Cortex---the O-GlcNAcylation of Synaptic and Trafficking Proteins Related to Neurodegenerative Diseases.

Van N Huynh, Sheng Wang, Xiaosen Ouyang, Willayat Y Wani, Michelle S Johnson, Balu K Chacko, Anil G Jegga, Wei-Jun Qian, John C Chatham, Victor M Darley-Usmar and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in aging, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Ultradeep O-GlcNAc proteomics reveals widespread O-GlcNAcylation on tyrosine residues of proteins.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Review
  6. Glycosylation in aging and neurodegenerative diseases.Acta biochimica et biophysica Sinica · 2024
    Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Van N HuynhDepartment of Pathology, Center for Free Radical Biology, University of Alabama at Birmingham, Birmingham, AL, United States.
Sheng WangBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, United States.
Xiaosen OuyangDepartment of Pathology, Center for Free Radical Biology, University of Alabama at Birmingham, Birmingham, AL, United States.
Willayat Y WaniDepartment of Pathology, Center for Free Radical Biology, University of Alabama at Birmingham, Birmingham, AL, United States.
Michelle S JohnsonDepartment of Pathology, Center for Free Radical Biology, University of Alabama at Birmingham, Birmingham, AL, United States.
Balu K ChackoDepartment of Pathology, Center for Free Radical Biology, University of Alabama at Birmingham, Birmingham, AL, United States.
Anil G JeggaDivision of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, United States.
Wei-Jun QianBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, United States.
John C ChathamDepartment of Pathology, Center for Free Radical Biology, University of Alabama at Birmingham, Birmingham, AL, United States.
Victor M Darley-UsmarDepartment of Pathology, Center for Free Radical Biology, University of Alabama at Birmingham, Birmingham, AL, United States.
Jianhua ZhangDepartment of Pathology, Center for Free Radical Biology, University of Alabama at Birmingham, Birmingham, AL, United States.
University of Alabama at Birmingham · USPacific Northwest National Laboratory · USCincinnati Children's Hospital Medical Center · US

Funding

O-GlcNAc regulation of protein clearance in the context of AD and DLBR56AG060959 · NIA · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI CHATHAM, JOHN C, ZHANG, JIANHUA · 2019 to 2019
$371k
BLRD VA I01 BX004251NIA NIH HHS R56 AG060959
6 · The paper itself

Abstract

O-linked conjugation of ß-N-acetyl-glucosamine (O-GlcNAc) to serine and threonine residues is a post-translational modification process that senses nutrient availability and cellular stress and regulates diverse biological processes that are involved in neurodegenerative diseases and provide potential targets for therapeutics development. However, very little is known of the networks involved in the brain that are responsive to changes in the O-GlcNAc proteome. Pharmacological increase of protein O-GlcNAcylation by Thiamet G (TG) has been shown to decrease tau phosphorylation and neurotoxicity, and proposed as a therapy in Alzheimer's disease (AD). However, acute TG exposure impairs learning and memory, and protein O-GlcNAcylation is increased in the aging rat brain and in Parkinson's disease (PD) brains. To define the cortical O-GlcNAc proteome that responds to TG, we injected young adult mice with either saline or TG and performed mass spectrometry analysis for detection of O-GlcNAcylated peptides. This approach identified 506 unique peptides corresponding to 278 proteins that are O-GlcNAcylated. Of the 506 unique peptides, 85 peptides are elevated by > 1.5 fold in O-GlcNAcylation levels in response to TG. Using pathway analyses, we found TG-dependent enrichment of O-GlcNAcylated synaptic proteins, trafficking, Notch/Wnt signaling, HDAC signaling, and circadian clock proteins. Significant changes in the O-GlcNAcylation of DNAJC6/AUXI, and PICALM, proteins that are risk factors for PD and/or AD respectively, were detected. We compared our study with two key prior O-GlcNAc proteome studies using mouse cerebral tissue and human AD brains. Among those identified to be increased by TG, 15 are also identified to be increased in human AD brains compared to control, including those involved in cytoskeleton, autophagy, chromatin organization and mitochondrial dysfunction. These studies provide insights regarding neurodegenerative diseases therapeutic targets.

Indexed as

DnaJC6mass spectrometryOGAO-GlcNAcPICALMthiamet G

Identifiers

PMID35822049
PMCPMC9261315
OpenAlexW3203514014

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.