Evidence map›Paper›PMID 35821038›Full record

ArticleScientific reports2022

Stochastic model of ERK-mediated progesterone receptor translocation, clustering and transcriptional activity.

Tatiana T Marquez-Lago, Stanly Steinberg

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Tatiana T Marquez-LagoDepartment of Genetics, School of Medicine, University of Alabama at Birmingham, Birmingham, AL, USA. tmarquez@uab.edu.
Stanly SteinbergDepartment of Mathematics and Statistics, University of New Mexico, Albuquerque, NM, USA.
University of Alabama at Birmingham · USUniversity of New Mexico · US

Funding

Blocking CMV transmission through the human milk metabolome and microbiomeR01HD102690 · NICHD · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI MARQUEZ-LAGO, TATIANA T. · 2021 to 2024
$2.2M
NICHD NIH HHS R01 HD102690
6 · The paper itself

Abstract

Progesterone receptor (PR) transcriptional activity is a key factor in the differentiation of the uterine endometrium. By consequence, progestin has been identified as an important treatment modality for endometrial cancer. PR transcriptional activity is controlled by extracellular-signal-regulated kinase (ERK) mediated phosphorylation, downstream of growth factor receptors such as EGFR. However, phosphorylation of PR also targets it for ubiquitination and destruction in the proteasome. Quantitative studies of these opposing roles are much needed toward validation of potential new progestin-based therapeutics. In this work, we propose a spatial stochastic model to study the effects of the opposing roles for PR phosphorylation on the levels of active transcription factor. Our numerical simulations confirm earlier in vitro experiments in endometrial cancer cell lines, identifying clustering as a mechanism that amplifies the ability of progesterone receptors to influence gene transcription. We additionally show the usefulness of a statistical method we developed to quantify and control variations in stochastic simulations in general biochemical systems, assisting modelers in defining minimal but meaningful numbers of simulations while guaranteeing outputs remain within a pre-defined confidence level.

Indexed as

Endometrial NeoplasmsReceptors, ProgesteroneCluster AnalysisExtracellular Signal-Regulated MAP KinasesFemaleHumansProgesteroneProgesterone CongenersProgestinsSignal TransductionTranslocation, GeneticExtracellular Signal-Regulated MAP KinasesProgesteroneProgesterone CongenersProgestinsReceptors, Progesterone

Identifiers

PMID35821038
PMCPMC9276744
OpenAlexW4285044067

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.