Evidence map›Paper›PMID 35820705›Full record

ArticleLife science alliance2022

ScRNA-seq expression of

Xin Li, Fred W Kolling, Daniel Aridgides, Diane Mellinger, Alix Ashare, Claudia V Jakubzick

Open access · goldAbstract read
In one paragraph

Article in Life science alliance, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
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  5. Article
  6. Single-cell transcriptomics reveal alveolar macrophage-specific responses in single-hit ozone exposure model in mice.American journal of physiology. Lung cellular and molecular physiology · 2026
    Article
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  20. (Inter)feron the Reaper: New Insights on an Old Cytokine in Secondary Bacterial Pneumonia.American journal of respiratory cell and molecular biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xin LiDepartment of Microbiology and Immunology, Dartmouth Geisel School of Medicine, Hanover, NH, USA.ORCID 0000-0002-2050-2628
Fred W KollingDepartment of Biomedical Data Science, Dartmouth Geisel School of Medicine, Hanover, NH, USA.
Daniel AridgidesDepartment of Medicine, Dartmouth Hitchcock Medical Center, Lebanon, NH, USA.
Diane MellingerDepartment of Medicine, Dartmouth Hitchcock Medical Center, Lebanon, NH, USA.
Alix AshareDepartment of Microbiology and Immunology, Dartmouth Geisel School of Medicine, Hanover, NH, USA claudia.jakubzick@dartmouth.edu alix.ashare@hitchcock.org.ORCID 0000-0002-2413-5845
Claudia V JakubzickDepartment of Microbiology and Immunology, Dartmouth Geisel School of Medicine, Hanover, NH, USA claudia.jakubzick@dartmouth.edu alix.ashare@hitchcock.org.ORCID 0000-0002-3731-0198
Dartmouth College · USDartmouth–Hitchcock Medical Center · US

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Fred W Kolling IV · 1985 to 2026
$91.3M
Zhao - Proj 2P20GM130454 · NIGMS · DARTMOUTH COLLEGE · PI MICHAEL L WHITFIELD · 2019 to 2026
$27.2M
Human and mouse transcriptome profiling identifies cross-species homology of mononuclear phagocytesR35HL155458 · NHLBI · DARTMOUTH COLLEGE · PI Claudia V Jakubzick · 2021 to 2026
$5.9M
Understanding the unique role endogenous APC subtypes play during the rejection of MAg-mismatched cellsR01HL115334 · NHLBI · NATIONAL JEWISH HEALTH · PI JAKUBZICK, CLAUDIA V · 2013 to 2020
$3.3M
Functional roles of human pulmonary DC's in the lung draining lymph nodesR01HL135001 · NHLBI · NATIONAL JEWISH HEALTH · PI JAKUBZICK, CLAUDIA V · 2017 to 2020
$2.3M
Regional Hypoxia Impacts the Heterogeneity of Inflammatory Lung DiseaseR01HL122372 · NHLBI · DARTMOUTH-HITCHCOCK CLINIC · PI ASHARE, ALIX · 2015 to 2019
$2.0M
Macrophage Pathogen Interactions in Regional Cystic Fibrosis Lung InflammationK24HL150453 · NHLBI · DARTMOUTH-HITCHCOCK CLINIC · PI ASHARE, ALIX · 2020 to 2024
$542k
Acquisition of the NextSeq2000 Sequencing platform to Increase Next Generation Sequencing Throughput While Reducing Costs at DartmouthS10OD030242 · OD · DARTMOUTH COLLEGE · PI KOLLING IV, FRED W · 2021 to 2021
$321k
10X Genomics Chromium Single-cell Sequencing to Expand Research At DartmouthS10OD025235 · OD · DARTMOUTH COLLEGE · PI TOMLINSON, CRAIG R · 2018 to 2018
$125k
NCI NIH HHS P30 CA023108NHLBI NIH HHS K24 HL150453NHLBI NIH HHS R01 HL115334NHLBI NIH HHS R01 HL122372NHLBI NIH HHS R01 HL135001NHLBI NIH HHS R35 HL155458NIGMS NIH HHS P20 GM130454NIH HHS S10 OD025235NIH HHS S10 OD030242
6 · The paper itself

Abstract

Alveolar macrophages (AMs) reside on the luminal surface of the airways and alveoli, ensuring proper gas exchange by ingesting cellular debris and pathogens, and regulating inflammatory responses. Therefore, understanding the heterogeneity and diverse roles played by AMs, interstitial macrophages, and recruited monocytes is critical for treating airway diseases. We performed single-cell RNA sequencing on 113,213 bronchoalveolar lavage cells from four healthy and three uninflamed cystic fibrosis subjects and identified two MARCKS

Indexed as

Apolipoprotein C-IIMacrophages, AlveolarMembrane ProteinsBronchoalveolar Lavage FluidChemokinesHumansSingle-Cell AnalysisApolipoprotein C-IIChemokinesIFI27 protein, humanMembrane Proteins

Identifiers

PMID35820705
PMCPMC9275597
OpenAlexW4285091948

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.