Evidence map›Paper›PMID 35819403›Full record

ArticleCancer discovery2022

AACR Project GENIE: 100,000 Cases and Beyond.

Trevor J Pugh, Jonathan L Bell, Jeff P Bruce, Gary J Doherty, Matthew Galvin, Michelle F Green, Haley Hunter-Zinck, Priti Kumari, Michele L Lenoue-Newton, Marilyn M Li and 9 more

Open access · hybridAbstract read
In one paragraph

Article in Cancer discovery, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
8.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 99 citations in OpenAlex.

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7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 11 institutions in 3 countries.

Trevor J PughPrincess Margaret Cancer Centre, University Health Network, Toronto, Ontario, Canada.ORCID 0000-0002-8073-5888
Jonathan L BellDuke University Medical Center, Durham, North Carolina.ORCID 0000-0002-5100-6299
Jeff P BrucePrincess Margaret Cancer Centre, University Health Network, Toronto, Ontario, Canada.ORCID 0000-0001-5509-9990
Gary J DohertyCancer Research United Kingdom (CRUK) Cambridge Centre, Cambridge, United Kingdom.ORCID 0000-0002-8158-8111
Matthew GalvinEarle A. Chiles Research Institute, Portland, Oregon.ORCID 0000-0003-2040-8567
Michelle F GreenDuke University Medical Center, Durham, North Carolina.ORCID 0000-0002-6055-4342
Haley Hunter-ZinckSage Bionetworks, Seattle, Washington.ORCID 0000-0001-5853-3668
Priti KumariDana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0003-4437-0620
Michele L Lenoue-NewtonVanderbilt University Medical Center, Nashville, Tennessee.ORCID 0000-0003-3469-3784
Marilyn M LiThe Children's Hospital of Philadelphia, Philadelphia, Pennsylvania.ORCID 0000-0002-4253-2369
James LindsayDana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0002-6295-098X
Tali MazorDana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0002-0138-9615
Andrea OvalleDana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0001-8473-6821
Stephen-John SammutCancer Research United Kingdom (CRUK) Cambridge Centre, Cambridge, United Kingdom.ORCID 0000-0003-4472-904X
Nikolaus SchultzMemorial Sloan Kettering Cancer Center, New York, New York.ORCID 0000-0002-0131-4904
Thomas V YuSage Bionetworks, Seattle, Washington.ORCID 0000-0002-5841-0198
Shawn M SweeneyAmerican Association for Cancer Research, Philadelphia, Pennsylvania.ORCID 0000-0002-4269-6566
Brady BernardEarle A. Chiles Research Institute, Portland, Oregon.ORCID 0000-0003-2118-9829
AACR Project GENIE Consortium, Genomics and Analysis Working Group
Dana-Farber Cancer Institute · USCambridge University Hospitals NHS Foundation Trust · GBDuke Medical Center · USOregon Research Institute · USSage Bionetworks · USAmerican Association For Cancer Research · USChildren's Hospital of Philadelphia · USKettering University · USOntario Institute for Cancer Research · CAUniversity Health Network · CAVanderbilt University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

The American Association for Cancer Research (AACR) Project Genomics Evidence Neoplasia Information Exchange (GENIE) is an international pan-cancer registry with the goal to inform cancer research and clinical care worldwide. Founded in late 2015, the milestone GENIE 9.1-public release contains data from >110,000 tumors from >100,000 people treated at 19 cancer centers from the United States, Canada, the United Kingdom, France, the Netherlands, and Spain. Here, we demonstrate the use of these real-world data, harmonized through a centralized data resource, to accurately predict enrollment on genome-guided trials, discover driver alterations in rare tumors, and identify cancer types without actionable mutations that could benefit from comprehensive genomic analysis. The extensible data infrastructure and governance framework support additional deep patient phenotyping through biopharmaceutical collaborations and expansion to include new data types such as cell-free DNA sequencing. AACR Project GENIE continues to serve a global precision medicine knowledge base of increasing impact to inform clinical decision-making and bring together cancer researchers internationally. SIGNIFICANCE: AACR Project GENIE has now accrued data from >110,000 tumors, placing it among the largest repository of publicly available, clinically annotated genomic data in the world. GENIE has emerged as a powerful resource to evaluate genome-guided clinical trial design, uncover drivers of cancer subtypes, and inform real-world use of genomic data. This article is highlighted in the In This Issue feature, p. 2007.

Indexed as

Cell-Free Nucleic AcidsNeoplasmsGenomicsHumansMutationPrecision MedicineUnited StatesCell-Free Nucleic Acids

Identifiers

PMID35819403
PMCPMC9437568
OpenAlexW4285077014

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.