Evidence map›Paper›PMID 35819177›Full record

ArticleAmerican journal of physiology. Gastrointestinal and liver physiology2022

Rab11FIP1-deficient mice develop spontaneous inflammation and show increased susceptibility to colon damage.

Sudiksha Rathan-Kumar, Joseph T Roland, Michael Momoh, Anna Goldstein, Lynne A Lapierre, Elizabeth Manning, Louise Mitchell, Jim Norman, Izumi Kaji, James R Goldenring

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Gastrointestinal and liver physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Sudiksha Rathan-KumarSection of Surgical Sciences, Vanderbilt University Medical Center, Nashville, Tennessee.
Joseph T RolandSection of Surgical Sciences, Vanderbilt University Medical Center, Nashville, Tennessee.
Michael MomohSection of Surgical Sciences, Vanderbilt University Medical Center, Nashville, Tennessee.
Anna GoldsteinSection of Surgical Sciences, Vanderbilt University Medical Center, Nashville, Tennessee.
Lynne A LapierreSection of Surgical Sciences, Vanderbilt University Medical Center, Nashville, Tennessee.
Elizabeth ManningSection of Surgical Sciences, Vanderbilt University Medical Center, Nashville, Tennessee.
Louise MitchellCancer Research UK Beatson Institute, Glasgow, Scotland, United Kingdom.
Jim NormanCancer Research UK Beatson Institute, Glasgow, Scotland, United Kingdom.
Izumi KajiSection of Surgical Sciences, Vanderbilt University Medical Center, Nashville, Tennessee.ORCID 0000-0001-5395-0497
James R GoldenringSection of Surgical Sciences, Vanderbilt University Medical Center, Nashville, Tennessee.ORCID 0000-0002-7833-2940
Vanderbilt University Medical Center · USCancer Research UK Scotland Institute · GBVanderbilt University · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI STACIE B DUSETZINA · 1995 to 2026
$172.8M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
Vanderbilt Diabetes Research CenterP30DK020593 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ALVIN C POWERS · 2012 to 2026
$29.3M
Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI David J. Calkins · 1989 to 2026
$19.6M
Vanderbilt Mouse Metabolic Physiology CenterU24DK059637 · NIDDK · VANDERBILT UNIVERSITY · PI WASSERMAN, DAVID H · 2001 to 2015
$14.9M
COngenital Diarrhea and Enteropathy (PediCODE) Consortium and BioRepositoryRC2DK118640 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI James Richard Goldenring, Izumi Kaji · 2019 to 2026
$14.8M
SMALL GTP BINDING PROTEINS IN GASTROINTESTINAL MUCOSAR01DK048370 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GOLDENRING, JAMES RICHARD · 1994 to 2025
$10.1M
Impacting the pathophysiology of malabsorption induced by Myosin Vb inactivating mutationsR01DK128190 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KAJI, IZUMI · 2021 to 2025
$1.9M
Ariol SL200 Digital Imaging SystemIS1BX003097 · VA · VETERANS HEALTH ADMINISTRATION · PI GOLDENRING, JAMES RICHARD · 2015 to 2015
–
BLRD VA IS1 BX003097Cancer Research UK 27145Cancer Research UK 28291Cancer Research UK C596/A17196Cancer Research UK C596/A18076NCI NIH HHS P30 CA068485NEI NIH HHS P30 EY008126NIDDK NIH HHS P30 DK020593NIDDK NIH HHS P30 DK058404NIDDK NIH HHS R01 DK048370NIDDK NIH HHS R01 DK128190NIDDK NIH HHS RC2 DK118640NIDDK NIH HHS U24 DK059637
6 · The paper itself

Abstract

The small GTPase, Rab11a, regulates vesicle trafficking and cell polarity in epithelial cells through interaction with Rab11 family-interacting proteins (Rab11-FIPs). We hypothesized that deficiency of Rab11-FIP1 would affect mucosal integrity in the intestine. Global Rab11FIP1 knockout (KO) mice were generated by deletion of the second exon. Pathology of intestinal tissues was analyzed by immunostaining of colonic sections and RNA-sequencing of isolated colonic epithelial cells. A low concentration of dextran sodium sulfate (DSS, 2%) was added to drinking water for 5 days, and injury score was compared between Rab11FIP1 KO, Rab11FIP2 KO, and heterozygous littermates. Rab11FIP1 KO mice showed normal fertility and body weight gain. More frequent lymphoid patches and infiltration of macrophages and neutrophils were identified in Rab11FIP1 KO mice before the development of rectal prolapse compared with control mice. The population of trefoil factor 3 (TFF3)-positive goblet cells was significantly lower, and the ratio of proliferative to nonproliferative cells was higher in Rab11FIP1 KO colons. Transcription signatures indicated that Rab11FIP1 deletion downregulated genes that mediate stress tolerance response, whereas genes mediating the response to infection were significantly upregulated, consistent with the inflammatory responses in the steady state. Lack of Rab11FIP1 also resulted in abnormal accumulation of subapical vesicles in colonocytes and the internalization of transmembrane mucin, MUC13, with Rab14. After DSS treatment, Rab11FIP1 KO mice showed greater body weight loss and more severe mucosal damage than those in heterozygous littermates. These findings suggest that Rab11FIP1 is important for cytoprotection mechanisms and for the maintenance of colonic mucosal integrity.

Indexed as

Adaptor Proteins, Signal TransducingColitisMembrane ProteinsAnimalsColonDextran SulfateInflammationIntestinal MucosaMiceMice, KnockoutAdaptor Proteins, Signal TransducingDextran SulfateMembrane ProteinsRab11FIP1 protein, mousecolonMUC13Rab11Rab11FIP1Rab14

Identifiers

PMID35819177
PMCPMC9423785
OpenAlexW4285077327

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.