Evidence map›Paper›PMID 35816382›Full record

ArticleJMIR cancer2022

Exploring the Association of Cancer and Depression in Electronic Health Records: Combining Encoded Diagnosis and Mining Free-Text Clinical Notes.

Angela Leis, David Casadevall, Joan Albanell, Margarita Posso, Francesc Macià, Xavier Castells, Juan Manuel Ramírez-Anguita, Jordi Martínez Roldán, Laura I Furlong, Ferran Sanz and 2 more

Open access · goldAbstract read
In one paragraph

Article in JMIR cancer, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 6 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Angela LeisResearch Programme on Biomedical Informatics, Hospital del Mar Medical Research Institute, Barcelona, Spain.ORCID https://orcid.org/0000-0003-4780-7111
David CasadevallCancer Research Program, Hospital del Mar Research Institute, Barcelona, Spain.ORCID https://orcid.org/0000-0002-3986-2084
Joan AlbanellCancer Research Program, Hospital del Mar Research Institute, Barcelona, Spain.ORCID https://orcid.org/0000-0003-1239-4580
Margarita PossoDepartment of Epidemiology, Hospital del Mar Research Institute, Barcelona, Spain.ORCID https://orcid.org/0000-0002-5053-257X
Francesc MaciàDepartment of Epidemiology, Hospital del Mar Research Institute, Barcelona, Spain.ORCID https://orcid.org/0000-0002-6090-5894
Xavier CastellsDepartment of Epidemiology, Hospital del Mar Research Institute, Barcelona, Spain.ORCID https://orcid.org/0000-0002-2528-0382
Juan Manuel Ramírez-AnguitaResearch Programme on Biomedical Informatics, Hospital del Mar Medical Research Institute, Barcelona, Spain.ORCID https://orcid.org/0000-0002-8509-0927
Jordi Martínez RoldánInnovation and Digital Transformation Area, Hospital del Mar, Barcelona, Spain.ORCID https://orcid.org/0000-0002-4565-6228
Laura I FurlongResearch Programme on Biomedical Informatics, Hospital del Mar Medical Research Institute, Barcelona, Spain.ORCID https://orcid.org/0000-0002-9383-528X
Ferran SanzResearch Programme on Biomedical Informatics, Hospital del Mar Medical Research Institute, Barcelona, Spain.ORCID https://orcid.org/0000-0002-7534-7661
Francesco RonzanoDepartment of Medicine and Life Sciences, Universitat Pompeu Fabra, Barcelona, Spain.ORCID https://orcid.org/0000-0001-5037-9061
Miguel A MayerResearch Programme on Biomedical Informatics, Hospital del Mar Medical Research Institute, Barcelona, Spain.ORCID https://orcid.org/0000-0003-0362-6298
Universitat Pompeu Fabra · ESHospital Del Mar · ESRed de Investigación en Actividades Preventivas y Promoción de la Salud · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundA cancer diagnosis is a source of psychological and emotional stress, which are often maintained for sustained periods of time that may lead to depressive disorders. Depression is one of the most common psychological conditions in patients with cancer. According to the Global Cancer Observatory, breast and colorectal cancers are the most prevalent cancers in both sexes and across all age groups in Spain.

objectiveThis study aimed to compare the prevalence of depression in patients before and after the diagnosis of breast or colorectal cancer, as well as to assess the usefulness of the analysis of free-text clinical notes in 2 languages (Spanish or Catalan) for detecting depression in combination with encoded diagnoses.

methodsWe carried out an analysis of the electronic health records from a general hospital by considering the different sources of clinical information related to depression in patients with breast and colorectal cancer. This analysis included ICD-9-CM (International Classification of Diseases, Ninth Revision, Clinical Modification) diagnosis codes and unstructured information extracted by mining free-text clinical notes via natural language processing tools based on Systematized Nomenclature of Medicine Clinical Terms that mentions symptoms and drugs used for the treatment of depression.

resultsWe observed that the percentage of patients diagnosed with depressive disorders significantly increased after cancer diagnosis in the 2 types of cancer considered-breast and colorectal cancers. We managed to identify a higher number of patients with depression by mining free-text clinical notes than the group selected exclusively on ICD-9-CM codes, increasing the number of patients diagnosed with depression by 34.8% (441/1269). In addition, the number of patients with depression who received chemotherapy was higher than those who did not receive this treatment, with significant differences (P<.001).

conclusionsThis study provides new clinical evidence of the depression-cancer comorbidity and supports the use of natural language processing for extracting and analyzing free-text clinical notes from electronic health records, contributing to the identification of additional clinical data that complements those provided by coded data to improve the management of these patients.

Indexed as

cancerdepressionelectronic health recordsnatural language processingtext mining

Identifiers

PMID35816382
PMCPMC9315897
OpenAlexW4283164534

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.