Evidence map›Paper›PMID 35812404›Full record

ArticleFrontiers in immunology2022

Insight of a Metabolic Prognostic Model to Identify Tumor Environment and Drug Vulnerability for Lung Adenocarcinoma.

Shun-Li Peng, Rong Wang, Yu-Ling Zhou, Wei Wei, Gui-Hua Zhong, Xiao-Tao Huang, Shuai Yang, Qiao-Dan Liu, Zhi-Gang Liu

Abstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Shun-Li PengThe Cancer Center of the Fifth Affiliated Hospital of Sun Yat-sen University, Zhuhai, China.
Rong WangThe Cancer Center of the Fifth Affiliated Hospital of Sun Yat-sen University, Zhuhai, China.
Yu-Ling ZhouThe Cancer Center of the Fifth Affiliated Hospital of Sun Yat-sen University, Zhuhai, China.
Wei WeiThe Cancer Center of the Fifth Affiliated Hospital of Sun Yat-sen University, Zhuhai, China.
Gui-Hua ZhongThe Cancer Center of the Fifth Affiliated Hospital of Sun Yat-sen University, Zhuhai, China.
Xiao-Tao HuangThe Cancer Center of the Fifth Affiliated Hospital of Sun Yat-sen University, Zhuhai, China.
Shuai YangThe Cancer Center of the Fifth Affiliated Hospital of Sun Yat-sen University, Zhuhai, China.
Qiao-Dan LiuThe Cancer Center of the Fifth Affiliated Hospital of Sun Yat-sen University, Zhuhai, China.
Zhi-Gang LiuThe Cancer Center of the Fifth Affiliated Hospital of Sun Yat-sen University, Zhuhai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metabolic reprogramming is a novel method for the treatment of malignant tumors. The exploration of metabolism procedures between radiosensitive and radioresistant tumors may provide novel perspectives for lung adenocarcinoma (LUAD) patients after radiation therapy. In our study, metabolic reprogramming and immune response changes were found between radioresistant cell line (A549RR) and its parent cells (A549) using gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. Nucleotide/amino acid, lipid, and glucose metabolic process, including Alanine, aspartate and glutamate metabolism, Tryptophan/Tyrosine metabolism, Butanoate metabolism, Purine/Pyrimidine metabolism, were screened out. Then molecular signatures database and The Cancer Genome Atlas Program (TCGA) lung adenocarcinoma datasets were used to identify metabolism-related genes (MRGs) between radiosensitive and radioresistant lung adenocarcinoma (LUAD) cells. A metabolism-based prognostic model, receiver operating characteristic (ROC) curve and nomogram were constructed using Metabolism Score calculated by 14 metabolism-related genes (MRGs). Three independent public datasets, (GSE72094, GSE3141, GSE8894) and one immunotherapy cohort (IMvigor210) were used as external validation cohorts. Expression of 14 hub genes in cells, normal and LUAD specimens were explored by Human Protein Atlas, TIMER2.0 and RT-qPCR. Patients with low-Metabolism Scores were correlated with longer survival times, higher response rates to immune checkpoint inhibitors (ICIs), different immune cell infiltrations and drug vulnerability. Our study demonstrated a comprehensive landscape between radiosensitive and radioresistant LUAD, and provide novel targets for NSCLC, especially those patients received radiation therapy. Moreover, this metabolism-based prognostic model may help to investigate connections between radiosensitivity, immune response, metabolic reprogramming, and patients' prognosis.

Indexed as

Adenocarcinoma of LungLung NeoplasmsBiomarkers, TumorGene Expression Regulation, NeoplasticHumansPrognosisBiomarkers, Tumorimmune responsemetabolic signaturenon-small cell lung cancerprognostic modelradiosensitivity

Identifiers

PMID35812404
PMCPMC9262104

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.