Evidence map›Paper›PMID 35810714›Full record

ArticleBioorganic & medicinal chemistry2022

Synthesis and mammalian cell compatibility of light-released glycan precursors for controlled metabolic engineering.

Courtney A Kondor, Jaggaiah N Gorantla, Garry D Leonard, Charlie Fehl

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Courtney A KondorDepartment of Chemistry, Wayne State University, 5101 Cass Ave, Detroit, MI 48202, USA.
Jaggaiah N GorantlaDepartment of Chemistry, Wayne State University, 5101 Cass Ave, Detroit, MI 48202, USA.
Garry D LeonardDepartment of Chemistry, Wayne State University, 5101 Cass Ave, Detroit, MI 48202, USA.
Charlie FehlDepartment of Chemistry, Wayne State University, 5101 Cass Ave, Detroit, MI 48202, USA. Electronic address: charlie.fehl@wayne.edu.

Funding

Tailoring Structures of Sulfated Oligosaccharides for Modulating Heparanase ActivityR01GM098285 · NIGMS · WAYNE STATE UNIVERSITY · PI NGUYEN, HIEN M · 2012 to 2022
$3.5M
Spatiotemporal tools to interrogate O-GlcNAc functions in metabolic signaling and diseaseR35GM142637 · NIGMS · WAYNE STATE UNIVERSITY · PI Charlie Fehl · 2021 to 2026
$2.6M
Training Modules at Wayne State University to Promote Safe and Inclusive EnvironmentsT32GM139807 · NIGMS · WAYNE STATE UNIVERSITY · PI BRYANT-FRIEDRICH, AMANDA C, CHOW, CHRISTINE S · 2021 to 2025
$2.6M
Novel method to quantify conditioned fear-based neuronal activity in rat brain in vivo using high-resolution photoacoustic imagingF30MH122093 · NIMH · WAYNE STATE UNIVERSITY · PI MATCHYNSKI, JAMES · 2020 to 2023
$200k
NIGMS NIH HHS R01 GM098285NIGMS NIH HHS R35 GM142637NIGMS NIH HHS T32 GM139807NIMH NIH HHS F30 MH122093
6 · The paper itself

Abstract

Sugar additions to biomolecules, or glycans, are some of the most abundant biomolecule modifications in biology because they enable cells to adapt to changing nutrient and stress conditions. An unmet challenge for the field of glycobiology is the study of glycan biosynthetic pathways with chemical control, especially in live cell settings. The objective of this study was to create biocompatible glycan precursors with controlled release properties. Here, we report eleven "caged" sugar probes that release glycan biosynthetic precursor molecules upon light exposure. The specific sugar pathways we target with our probes regulate the addition of the N-acetyl sugars GlcNAc, GalNAc, and sialic acid onto biomolecules in cells, each of which has the potential to alter glycan processes involved in cell morphology, signaling, and behavior. We hypothesized that our glycan precursor probes would remain biologically inert until light-initiated decaging conditions were met, avoiding biological activities including metabolism and cytotoxicity. The photocaged analogs of GlcNAc, GalNAc, and ManNAc (sialic acid precursor) sugars, which we call "photo-sugars," were released within minutes of light exposure at their optimal wavelengths. During the course of the study, we characterized the cell compatibility of these sugars under their respective decaging conditions, and found highly cell compatible GlcNAc, GalNAc, and ManNAc photocaged precursors. Release of GlcNAc-1-phosphate precursors led to altered ATP levels in cells, demonstrating preliminary metabolic engineering. We envision these probes as useful additions to the chemical glycobiology field that will enable spatiotemporal control over glycosylation pathways in living mammalian cells.

Indexed as

Metabolic EngineeringPolysaccharidesAnimalsMammalsN-Acetylneuraminic AcidSugarsN-Acetylneuraminic AcidPolysaccharidesSugarsCarbohydrate synthesisChemical biologyGlycobiologyMetabolic engineeringO-GalNAcO-GlcNAcPhotopharmacologySialic acids

Identifiers

PMID35810714
PMCPMC9378484

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.