Evidence map›Paper›PMID 35809576›Full record

ArticleAmerican journal of human genetics2022

Large-scale analyses of the X chromosome in 2,354 infertile men discover recurrently affected genes associated with spermatogenic failure.

Antoni Riera-Escamilla, Matthias Vockel, Liina Nagirnaja, Miguel J Xavier, Albert Carbonell, Daniel Moreno-Mendoza, Marc Pybus, Ginevra Farnetani, Viktoria Rosta, Francesca Cioppi and 17 more

Open access · greenAbstract read
In one paragraph

Article in American journal of human genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 14 institutions in 7 countries.

Antoni Riera-EscamillaAndrology Department, Fundació Puigvert, Universitat Autònoma de Barcelona, Instituto de Investigaciones Biomédicas Sant Pau, Barcelona, 08025 Catalonia, Spain.
Matthias VockelInstitute of Human Genetics, University of Münster, Vesaliusweg 12-14, 48149 Münster, Germany.
Liina NagirnajaDivision of Genetics, Oregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR 97006, USA.
Miguel J XavierFaculty of Medical Sciences, Biosciences Institute, Newcastle University, Newcastle upon Tyne NE2 4HH, UK.
Albert CarbonellInstitute of Molecular Biology of Barcelona, CSIC, Baldiri Reixac, 4, Barcelona, 08028 Catalonia, Spain; Institute for Research in Biomedicine, IRB Barcelona, The Barcelona Institute for Science and Technology, Baldiri Reixac, 10, Barcelona, 08028 Catalonia, Spain.
Daniel Moreno-MendozaAndrology Department, Fundació Puigvert, Universitat Autònoma de Barcelona, Instituto de Investigaciones Biomédicas Sant Pau, Barcelona, 08025 Catalonia, Spain; Department of Urology, Hospital del Oriente de Asturias, Arriondas, 33540 Asturias, Spain.
Marc PybusMolecular Biology Laboratory, Fundació Puigvert, Instituto de Investigaciones Biomédicas Sant Pau, Universitat Autònoma de Barcelona, Barcelona, 08025 Catalonia, Spain.
Ginevra FarnetaniDepartment of Biomedical, Experimental and Clinical Sciences Mario Serio, University of Florence, Florence 50139, Italy.
Viktoria RostaDepartment of Biomedical, Experimental and Clinical Sciences Mario Serio, University of Florence, Florence 50139, Italy.
Francesca CioppiDepartment of Biomedical, Experimental and Clinical Sciences Mario Serio, University of Florence, Florence 50139, Italy.
Corinna FriedrichInstitute of Reproductive Genetics, University of Münster, Vesaliusweg 12-14, 48149 Münster, Germany.
Manon S OudDepartment of Human Genetics, Donders Institute for Brain, Cognition and Behaviour, Radboudumc, Nijmegen 6525, the Netherlands.
Godfried W van der HeijdenDepartment of Obstetrics and Gynaecology, Radboudumc, Nijmegen 6525, the Netherlands.
Armin SoaveDepartment of Urology, University Medical Center Hamburg-Eppendorf, Hamburg 20251, Germany.
Thorsten DiemerClinic for Urology, Paediatric Urology and Andrology, Justus Liebig University, Gießen 35392, Germany.
Elisabet ArsMolecular Biology Laboratory, Fundació Puigvert, Instituto de Investigaciones Biomédicas Sant Pau, Universitat Autònoma de Barcelona, Barcelona, 08025 Catalonia, Spain.
Josvany Sánchez-CurbeloAndrology Department, Fundació Puigvert, Universitat Autònoma de Barcelona, Instituto de Investigaciones Biomédicas Sant Pau, Barcelona, 08025 Catalonia, Spain.
Sabine KlieschCentre of Reproductive Medicine and Andrology, Department of Clinical and Surgical Andrology, University Hospital Münster, Münster 48149, Germany.
Moira K O'BryanThe School of BioScience that the Bio21 Institute, The Faculty of Science, The University of Melbourne, Melbourne, VIC 3010, Australia.
Eduard Ruiz-CastañeAndrology Department, Fundació Puigvert, Universitat Autònoma de Barcelona, Instituto de Investigaciones Biomédicas Sant Pau, Barcelona, 08025 Catalonia, Spain.
GEMINI Consortium
Fernando AzorínInstitute of Molecular Biology of Barcelona, CSIC, Baldiri Reixac, 4, Barcelona, 08028 Catalonia, Spain; Institute for Research in Biomedicine, IRB Barcelona, The Barcelona Institute for Science and Technology, Baldiri Reixac, 10, Barcelona, 08028 Catalonia, Spain.
Joris A VeltmanFaculty of Medical Sciences, Biosciences Institute, Newcastle University, Newcastle upon Tyne NE2 4HH, UK.
Kenneth I AstonAndrology and IVF Laboratories, Division of Urology, Department of Surgery, University of Utah School of Medicine, Salt Lake City, UT 84132, USA.
Donald F ConradDivision of Genetics, Oregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR 97006, USA; Department of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA.
Frank TüttelmannInstitute of Reproductive Genetics, University of Münster, Vesaliusweg 12-14, 48149 Münster, Germany.
Csilla KrauszDepartment of Biomedical, Experimental and Clinical Sciences Mario Serio, University of Florence, Florence 50139, Italy. Electronic address: csilla.krausz@unifi.it.
Universitat Autònoma de Barcelona · ESUniversity of Florence · ITUniversity of Münster · DENewcastle University · GBOregon National Primate Research Center · USPuigvert Foundation · ESRadboud University Nijmegen · NLInstitut de Biologia Molecular de Barcelona · ESInstitute for Research in Biomedicine · ESUniversity Hospital Münster · DEUniversity Medical Center Hamburg-Eppendorf · DEUniversity of Giessen · DEUniversity of Melbourne · AUUniversity of Utah · US

Funding

GENOMICS OF SPERMATOGENIC IMPAIRMENTR01HD078641 · NICHD · WASHINGTON UNIVERSITY · PI Kenneth Ivan Aston, DONALD F. CONRAD · 2014 to 2026
$6.3M
NICHD NIH HHS R01 HD078641Wellcome Trust 209451Wellcome Trust 209451/Z/17/Z
6 · The paper itself

Abstract

Although the evolutionary history of the X chromosome indicates its specialization in male fitness, its role in spermatogenesis has largely been unexplored. Currently only three X chromosome genes are considered of moderate-definitive diagnostic value. We aimed to provide a comprehensive analysis of all X chromosome-linked protein-coding genes in 2,354 azoospermic/cryptozoospermic men from four independent cohorts. Genomic data were analyzed and compared with data in normozoospermic control individuals and gnomAD. While updating the clinical significance of known genes, we propose 21 recurrently mutated genes strongly associated with and 34 moderately associated with azoospermia/cryptozoospermia not previously linked to male infertility (novel). The most frequently affected prioritized gene, RBBP7, was found mutated in ten men across all cohorts, and our functional studies in Drosophila support its role in germ stem cell maintenance. Collectively, our study represents a significant step towards the definition of the missing genetic etiology in idiopathic severe spermatogenic failure and significantly reduces the knowledge gap of X-linked genetic causes of azoospermia/cryptozoospermia contributing to the development of future diagnostic gene panels.

Indexed as

AzoospermiaInfertility, MaleOligospermiaHumansMaleSpermatogenesisX Chromosomeazoospermiacryptozoospermiagenesgeneticsgenomicsmale infertilitynext-generation sequencingRBBP7spermatogenesisX chromosome

Identifiers

PMID35809576
PMCPMC9388793
OpenAlexW4284970556

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.