Evidence map›Paper›PMID 35807972›Full record

ArticleNanomaterials (Basel, Switzerland)2022

Molecular Fingerprinting of the Omicron Variant Genome of SARS-CoV-2 by SERS Spectroscopy.

Antonio Alessio Leonardi, Emanuele Luigi Sciuto, Maria Josè Lo Faro, Dario Morganti, Angelina Midiri, Corrado Spinella, Sabrina Conoci, Alessia Irrera, Barbara Fazio

Open access · goldAbstract read
In one paragraph

Article in Nanomaterials (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Antonio Alessio LeonardiDipartimento di Fisica e Astronomia "Ettore Majorana", Università degli Studi di Catania, Via S. Sofia 64, 95123 Catania, Italy.ORCID 0000-0001-7723-4356
Emanuele Luigi SciutoLab SENS CNR, Beyond NANO, Viale Ferdinando Stagno d'Alcontres 31, 98166 Messina, Italy.ORCID 0000-0003-4972-9874
Maria Josè Lo FaroDipartimento di Fisica e Astronomia "Ettore Majorana", Università degli Studi di Catania, Via S. Sofia 64, 95123 Catania, Italy.ORCID 0000-0002-2067-1608
Dario MorgantiDipartimento di Scienze Chimiche, Biologiche, Farmaceutiche, ed Ambientali, Università degli Studi di Messina, Viale Ferdinando Stagno d'Alcontres 31, 98166 Messina, Italy.
Angelina MidiriDipartimento di Patologia Umana, Università di Messina, Via Consolare Valeria 1, (Azienda Ospedaliera Universitaria Policlinico "G. Martino"), 98125 Messina, Italy.
Corrado SpinellaLab SENS CNR, Beyond NANO, Viale Ferdinando Stagno d'Alcontres 31, 98166 Messina, Italy.
Sabrina ConociLab SENS CNR, Beyond NANO, Viale Ferdinando Stagno d'Alcontres 31, 98166 Messina, Italy.
Alessia IrreraLab SENS CNR, Beyond NANO, Viale Ferdinando Stagno d'Alcontres 31, 98166 Messina, Italy.
Barbara FazioLab SENS CNR, Beyond NANO, Viale Ferdinando Stagno d'Alcontres 31, 98166 Messina, Italy.ORCID 0000-0002-1947-1123
University of Messina · ITUniversity of Catania · ITAzienda Ospedaliera Universitaria Policlinico "G. Martino" · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The continuing accumulation of mutations in the RNA genome of the SARS-CoV-2 virus generates an endless succession of highly contagious variants that cause concern around the world due to their antibody resistance and the failure of current diagnostic techniques to detect them in a timely manner. Raman spectroscopy represents a promising alternative to variants detection and recognition techniques, thanks to its ability to provide a characteristic spectral fingerprint of the biological samples examined under all circumstances. In this work we exploit the surface-enhanced Raman scattering (SERS) properties of a silver dendrite layer to explore, for the first time to our knowledge, the distinctive features of the Omicron variant genome. We obtain a complex spectral signal of the Omicron variant genome where the fingerprints of nucleobases in nucleosides are clearly unveiled and assigned in detail. Furthermore, the fractal SERS layer offers the presence of confined spatial regions in which the analyte remains trapped under hydration conditions. This opens up the prospects for a prompt spectral identification of the genome in its physiological habitat and for a study on its activity and variability.

Indexed as

Ag dendritesomicron variantSARS-CoV-2SERS

Identifiers

PMID35807972
PMCPMC9268696
OpenAlexW4283399273

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.