Evidence map›Paper›PMID 35806252›Full record

ArticleInternational journal of molecular sciences2022

Detection of Human Papillomavirus in Squamous Lesions of the Conjunctiva Using RNA and DNA In-Situ Hybridization.

Cornelia Peterson, Rupin N Parikh, Meleha T Ahmad, Ashley A Campbell, Yassine Daoud, Nicholas Mahoney, Sepideh Siadati, Charles G Eberhart

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Observational
  2. Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Cornelia PetersonDepartment of Molecular and Comparative Pathobiology, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0001-6550-1883
Rupin N ParikhDepartment of Ophthalmology, The Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Meleha T AhmadDepartment of Ophthalmology, The Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Ashley A CampbellDepartment of Ophthalmology, The Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Yassine DaoudDepartment of Ophthalmology, The Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Nicholas MahoneyDepartment of Ophthalmology, The Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Sepideh SiadatiDepartment of Pathology, The Johns Hopkins University School of Medicine, Baltimore, MD 21231, USA.
Charles G EberhartDepartment of Ophthalmology, The Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Johns Hopkins University · US

Funding

Training Veterinarians for Careers in Biomedical ResearchT32OD011089 · OD · JOHNS HOPKINS UNIVERSITY · PI JOSEPH L MANKOWSKI · 2012 to 2026
$6.7M
NIH HHS T32 OD011089
6 · The paper itself

Abstract

In-situ hybridization provides a convenient and reliable method to detect human papillomavirus (HPV) infection in formalin-fixed paraffin-embedded tissue. Cases of conjunctival papillomas, conjunctival intraepithelial neoplasia (CIN), conjunctival carcinoma in situ (cCIS), and invasive squamous cell carcinoma (SCC), in which low-risk (LR) and/or high-risk (HR) HPV types were evaluated by RNA or DNA in-situ hybridization, were retrospectively identified. LR HPV types were frequently detected in conjunctival papillomas (25/30, 83%), including 17/18 (94%) with RNA probes, compared to 8/12 (75%) with DNA probes. None of the CIN/cCIS or SCC cases were positive for LR HPV by either method. HR HPV was detected by RNA in-situ hybridization in 1/16 (6%) of CIN/cCIS cases and 2/4 (50%) of SCC cases, while DNA in-situ hybridization failed to detect HPV infection in any of the CIN/cCIS lesions. Reactive atypia and dysplasia observed in papillomas was generally associated with the detection of LR HPV types. Collectively, our findings indicate RNA in-situ hybridization may provide a high-sensitivity approach for identifying HPV infection in squamous lesions of the conjunctiva and facilitate the distinction between reactive atypia and true dysplasia. There was no clear association between HPV infection and atopy in papillomas or dysplastic lesions.

Indexed as

AlphapapillomavirusCarcinoma in SituCarcinoma, Squamous CellConjunctival NeoplasmsPapillomaPapillomavirus InfectionsConjunctivaDNA, ViralHumansPapillomaviridaeRetrospective StudiesRNADNA, ViralRNAcarcinoma in situconjunctivaconjunctival intraepithelial neoplasiahuman papillomavirusin-situ hybridizationpapillomasquamous cell carcinoma

Identifiers

PMID35806252
PMCPMC9266440
OpenAlexW4283743435

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.