Evidence map›Paper›PMID 35804047›Full record

ArticleScientific reports2022

Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition.

Ken-Ichi Harada, Kyoko Furuita, Eiki Yamashita, Ken-Ichiro Taoka, Hiroyuki Tsuji, Toshimichi Fujiwara, Atsushi Nakagawa, Chojiro Kojima

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ken-Ichi HaradaInstitute for Protein Research, Osaka University, Suita, Osaka, Japan.
Kyoko FuruitaInstitute for Protein Research, Osaka University, Suita, Osaka, Japan.
Eiki YamashitaInstitute for Protein Research, Osaka University, Suita, Osaka, Japan.
Ken-Ichiro TaokaKihara Institute for Biological Research, Yokohama City University, Yokohama, Japan.
Hiroyuki TsujiKihara Institute for Biological Research, Yokohama City University, Yokohama, Japan.
Toshimichi FujiwaraInstitute for Protein Research, Osaka University, Suita, Osaka, Japan.
Atsushi NakagawaInstitute for Protein Research, Osaka University, Suita, Osaka, Japan.
Chojiro KojimaInstitute for Protein Research, Osaka University, Suita, Osaka, Japan. kojima-chojiro-xk@ynu.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In potato (Solanum tuberosum L.), 14-3-3 protein forms a protein complex with the FLOWERING LOCUS T (FT)-like protein StSP6A and the FD-like protein StFDL1 to activate potato tuber formation. Eleven 14-3-3 isoforms were reported in potato, designated as St14a-k. In this study, the crystal structure of the free form of St14f was determined at 2.5 Å resolution. Three chains were included in the asymmetric unit of the St14f free form crystal, and the structural deviation among the three chain structures was found on the C-terminal helix H and I. The St14f free form structure in solution was also investigated by nuclear magnetic resonance (NMR) residual dipolar coupling analysis, and the chain B in the crystal structure was consistent with NMR data. Compared to other crystal structures, St14f helix I exhibited a different conformation with larger B-factor values. Larger B-factor values on helix I were also found in the 14-3-3 free form structure with higher solvent contents. The mutation in St14f Helix I stabilized the complex with StFDL1. These data clearly showed that the flexibility of helix I of 14-3-3 protein plays an important role in the recognition of target protein.

Indexed as

Solanum tuberosum14-3-3 ProteinsPlant ProteinsPlant Tubers14-3-3 ProteinsPlant Proteins

Identifiers

PMID35804047
PMCPMC9270373

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.