Evidence map›Paper›PMID 35801699›Full record

SynthesiseLife2022

Validation of a multi-ancestry polygenic risk score and age-specific risks of prostate cancer: A meta-analysis within diverse populations.

Fei Chen, Burcu F Darst, Ravi K Madduri, Alex A Rodriguez, Xin Sheng, Christopher T Rentsch, Caroline Andrews, Wei Tang, Adam S Kibel, Anna Plym and 25 more

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 3 pooled it
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 3 syntheses or guidelines pooled it, 33 citations in OpenAlex.

  1. Pooled it
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  15. Screening guidelines for individuals at increased risk for prostate cancer.Canadian Urological Association journal = Journal de l'Association des urologues du Canada · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 13 institutions in 8 countries.

Fei Chen *Department of Population and Public Health Sciences, University of Southern California, Los Angeles, United States.ORCID 0000-0002-1679-9932
Burcu F Darst *Department of Population and Public Health Sciences, University of Southern California, Los Angeles, United States.
Ravi K MadduriArgonne National Laboratory, Lemont, United States.ORCID 0000-0003-2130-2887
Alex A RodriguezArgonne National Laboratory, Lemont, United States.
Xin ShengDepartment of Population and Public Health Sciences, University of Southern California, Los Angeles, United States.
Christopher T RentschYale School of Medicine, New Haven, United States.
Caroline AndrewsHarvard TH Chan School of Public Health and Division of Population Sciences, Dana Farber Cancer Institute, Boston, United States.
Wei TangLaboratory of Human Carcinogenesis, Center for Cancer Research, National Cancer Institute, Bethesda, United States.
Adam S KibelDepartment of Surgery, Urology Division, Brigham and Women's Hospital, Harvard Medical School, Boston, United States.
Anna PlymDepartment of Surgery, Urology Division, Brigham and Women's Hospital, Harvard Medical School, Boston, United States.
Kelly ChoVA Boston Healthcare System, Boston, United States.
Mohamed JallohHôpital Général Idrissa Pouye, Dakar, Senegal.
Serigne Magueye GueyeHôpital Général Idrissa Pouye, Dakar, Senegal.
Lamine NiangHôpital Général Idrissa Pouye, Dakar, Senegal.
Olufemi J OgunbiyiCollege of Medicine, University of Ibadan and University College Hospital, Ibadan, Nigeria.ORCID 0000-0002-8748-2879
Olufemi PopoolaCollege of Medicine, University of Ibadan and University College Hospital, Ibadan, Nigeria.
Akindele O AdebiyiCollege of Medicine, University of Ibadan and University College Hospital, Ibadan, Nigeria.
Oseremen I Aisuodionoe-ShadrachCollege of Health Sciences, University of Abuja, University of Abuja Teaching Hospital and Cancer Science Center, Abuja, Nigeria.
Hafees O AjibolaCollege of Health Sciences, University of Abuja, University of Abuja Teaching Hospital and Cancer Science Center, Abuja, Nigeria.
Mustapha A JamdaCollege of Health Sciences, University of Abuja, University of Abuja Teaching Hospital and Cancer Science Center, Abuja, Nigeria.
Olabode P OluwoleCollege of Health Sciences, University of Abuja, University of Abuja Teaching Hospital and Cancer Science Center, Abuja, Nigeria.
Maxwell NwegbuCollege of Health Sciences, University of Abuja, University of Abuja Teaching Hospital and Cancer Science Center, Abuja, Nigeria.
Ben Adusei37 Military Hospital, Accra, Ghana.
Sunny Mante37 Military Hospital, Accra, Ghana.
Afua Darkwa-AbrahamsKorle-Bu Teaching Hospital, Accra, Ghana.ORCID 0000-0003-0649-3996
James E MensahKorle-Bu Teaching Hospital, Accra, Ghana.
Andrew Anthony AdjeiKorle-Bu Teaching Hospital, Accra, Ghana.
Halimatou DiopLaboratoires Bacteriologie et Virologie, Hôpital Aristide Le Dantec, Dakar, Senegal.
Joseph LachanceSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, United States.ORCID 0000-0002-4650-3741
Timothy R RebbeckHarvard TH Chan School of Public Health and Division of Population Sciences, Dana Farber Cancer Institute, Boston, United States.
Stefan AmbsLaboratory of Human Carcinogenesis, Center for Cancer Research, National Cancer Institute, Bethesda, United States.
J Michael GazianoVA Boston Healthcare System, Boston, United States.
Amy C JusticeYale School of Medicine, New Haven, United States.
David V ContiDepartment of Population and Public Health Sciences, University of Southern California, Los Angeles, United States.
Christopher A HaimanDepartment of Population and Public Health Sciences, University of Southern California, Los Angeles, United States.ORCID 0000-0002-0097-9971
University of Abuja Teaching Hospital · NGUniversity of Southern California · USBrigham and Women's Hospital · USKorle Bu Teaching Hospital · GHUniversity Hospital of Larissa · GRUniversity of Ibadan · NG37 Military Hospital · GHArgonne National Laboratory · USCancer Institute (WIA) · INDana-Farber Cancer Institute · USYale University · USGeorgia Institute of Technology · USHôpital Aristide Le Dantec · SN

Funding

Research on Prostate Cancer in Men of African Ancestry: Defining the Roles of Genetics, Immunity and Stress (RESPOND)U19CA214253 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HAIMAN, CHRISTOPHER ALAN · 2018 to 2023
$16.8M
Maryland Prostate Cancer Case-Control StudyZIABC010499 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI AMBS, STEFAN · 2009 to 2025
$11.4M
Epidemiological and Clinical Translational Studies Post Genome-Wide AssociationU19CA148537 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI EASTON, DOUGLAS FREDERICK, EELES, ROSALIND · 2010 to 2014
$10.4M
The Molecular Profile of Prostate Tumors in African-American MenZIABC010624 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI AMBS, STEFAN · 2009 to 2025
$8.0M
Leveraging Prospective Cancer Epidemiology Cohorts and Novel Methods to Improve Polygenic Risk ScoresU01CA261339 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Fei Chen, David V Conti · 2021 to 2026
$5.2M
Genome-wide sequencing of prostate cancer in men of African ancestryR01CA165862 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HAIMAN, CHRISTOPHER ALAN, REICH, DAVID E · 2012 to 2016
$3.1M
Multiethnic GWAS and TWAS to Inform Risk Prediction for Prostate CancerU01CA257328 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CONTI, DAVID V, HAIMAN, CHRISTOPHER ALAN · 2021 to 2025
$3.1M
Multidisciplinary Training in Ethnic Diversity and Cancer DisparitiesT32CA229110 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI HAIMAN, CHRISTOPHER ALAN, LE MARCHAND, LOIC · 2019 to 2023
$2.1M
Integrating Genomics and Metabolomics to Develop Predictive Models of Prostate Cancer in Multiethnic MenR00CA246063 · NCI · FRED HUTCHINSON CANCER CENTER · PI DARST, BURCU FRANCES · 2022 to 2024
$830k
Integrating Genomics and Metabolomics to Develop Predictive Models of Prostate Cancer in Multiethnic MenK99CA246063 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI DARST, BURCU FRANCES · 2020 to 2021
$246k
Medical Research Council MC_PC_17228Medical Research Council MC_QA137853NCI NIH HHS K99 CA246063NCI NIH HHS R00 CA246063NCI NIH HHS R01 CA165862NCI NIH HHS T32 CA229110NCI NIH HHS U01 CA257328NCI NIH HHS U01 CA261339NCI NIH HHS U19 CA148537NCI NIH HHS U19 CA214253
6 · The paper itself

Abstract

Background: We recently developed a multi-ancestry polygenic risk score (PRS) that effectively stratifies prostate cancer risk across populations. In this study, we validated the performance of the PRS in the multi-ancestry Million Veteran Program and additional independent studies. Methods: Within each ancestry population, the association of PRS with prostate cancer risk was evaluated separately in each case-control study and then combined in a fixed-effects inverse-variance-weighted meta-analysis. We further assessed the effect modification by age and estimated the age-specific absolute risk of prostate cancer for each ancestry population. Results: The PRS was evaluated in 31,925 cases and 490,507 controls, including men from European (22,049 cases, 414,249 controls), African (8794 cases, 55,657 controls), and Hispanic (1082 cases, 20,601 controls) populations. Comparing men in the top decile (90-100% of the PRS) to the average 40-60% PRS category, the prostate cancer odds ratio (OR) was 3.8-fold in European ancestry men (95% CI = 3.62-3.96), 2.8-fold in African ancestry men (95% CI = 2.59-3.03), and 3.2-fold in Hispanic men (95% CI = 2.64-3.92). The PRS did not discriminate risk of aggressive versus nonaggressive prostate cancer. However, the OR diminished with advancing age (European ancestry men in the top decile: ≤55 years, OR = 7.11; 55-60 years, OR = 4.26; >70 years, OR = 2.79). Men in the top PRS decile reached 5% absolute prostate cancer risk ~10 years younger than men in the 40-60% PRS category. Conclusions: Our findings validate the multi-ancestry PRS as an effective prostate cancer risk stratification tool across populations. A clinical study of PRS is warranted to determine whether the PRS could be used for risk-stratified screening and early detection. Funding: This work was supported by the National Cancer Institute at the National Institutes of Health (grant numbers U19 CA214253 to C.A.H., U01 CA257328 to C.A.H., U19 CA148537 to C.A.H., R01 CA165862 to C.A.H., K99 CA246063 to B.F.D, and T32CA229110 to F.C), the Prostate Cancer Foundation (grants 21YOUN11 to B.F.D. and 20CHAS03 to C.A.H.), the Achievement Rewards for College Scientists Foundation Los Angeles Founder Chapter to B.F.D, and the Million Veteran Program-MVP017. This research has been conducted using the UK Biobank Resource under application number 42195. This research is based on data from the Million Veteran Program, Office of Research and Development, and the Veterans Health Administration. This publication does not represent the views of the Department of Veteran Affairs or the United States Government.

Indexed as

Genome-Wide Association StudyProstatic NeoplasmsAge FactorsCase-Control StudiesGenetic Predisposition to DiseaseHumansMaleMiddle AgedMultifactorial InheritanceRisk FactorsUnited StatesAfrican ancestryepidemiologygeneticsgenomicsglobal healthhealth disparitiesHispanicmulti-ancestrynonepolygenic risk scoresprostate cancer

Identifiers

PMID35801699
PMCPMC9322982
OpenAlexW4284965409

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.