Evidence map›Paper›PMID 35799803›Full record

ArticleChemical science2022

MolE8: finding DFT potential energy surface minima values from force-field optimised organic molecules with new machine learning representations.

Sanha Lee, Kristaps Ermanis, Jonathan M Goodman

Open access · diamondAbstract read
In one paragraph

Article in Chemical science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. CONFPASS: Fast DFT Re-Optimizations of Structures from Conformation Searches.Journal of chemical information and modeling · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Sanha LeeYusuf Hamied Department of Chemistry, University of Cambridge Lensfield Road Cambridge CB2 1EW UK jmg11@cam.ac.uk.ORCID https://orcid.org/0000-0002-3940-0939
Kristaps ErmanisSchool of Chemistry University Park Nottingham NG7 2RD UK Kristaps.Ermanis@nottingham.ac.uk.ORCID https://orcid.org/0000-0001-9703-8758
Jonathan M GoodmanYusuf Hamied Department of Chemistry, University of Cambridge Lensfield Road Cambridge CB2 1EW UK jmg11@cam.ac.uk.ORCID https://orcid.org/0000-0002-8693-9136
University of Cambridge · GBUniversity of Nottingham · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The use of machine learning techniques in computational chemistry has gained significant momentum since large molecular databases are now readily available. Predictions of molecular properties using machine learning have advantages over the traditional quantum mechanics calculations because they can be cheaper computationally without losing the accuracy. We present a new extrapolatable and explainable molecular representation based on bonds, angles and dihedrals that can be used to train machine learning models. The trained models can accurately predict the electronic energy and the free energy of small organic molecules with atom types C, H N and O, with a mean absolute error of 1.2 kcal mol

Identifiers

PMID35799803
PMCPMC9214916
OpenAlexW4284966708

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.