Evidence map›Paper›PMID 35799782›Full record

ArticleFrontiers in immunology2022

Multi-Modal Single-Cell Sequencing Identifies Cellular Immunophenotypes Associated With Juvenile Dermatomyositis Disease Activity.

Jessica Neely, George Hartoularos, Daniel Bunis, Yang Sun, David Lee, Susan Kim, Chun Jimmie Ye, Marina Sirota

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 25 citations in OpenAlex.

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  8. Single-Cell Transcriptomics Reveals CCL3Journal of inflammation research · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jessica NeelyDivision of Pediatric Rheumatology, Department of Pediatrics, University of California San Francisco School of Medicine, San Francisco, CA, United States.
George HartoularosGraduate Program in Biological and Medical Informatics, University of California San Francisco, San Francisco, CA, United States.
Daniel BunisUCSF CoLabs, University of California San Francisco, San Francisco, CA, United States.
Yang SunDivision of Rheumatology, Department of Medicine, University of California San Francisco, San Francisco, CA, United States.
David LeeInstitute of Human Genetics, University of California San Francisco, San Francisco, CA, United States.
Susan KimDivision of Pediatric Rheumatology, Department of Pediatrics, University of California San Francisco School of Medicine, San Francisco, CA, United States.
Chun Jimmie YeInstitute of Human Genetics, University of California San Francisco, San Francisco, CA, United States.
Marina SirotaBakar Computational Health Sciences Institute, University of California San Francisco, San Francisco, CA, United States.
University of California, San Francisco · USParker Institute for Cancer Immunotherapy · US

Funding

RESOURCE-BASED CENTER FOR THE ADVANCEMENT OF PRECISION MEDICINE IN RHEUMATOLOGYP30AR070155 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Mary C Nakamura · 2016 to 2026
$8.2M
The Child Health Research Career Development Program at UCSFK12HD105250 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Raphael Hirsch · 2021 to 2026
$2.5M
NIAMS NIH HHS P30 AR070155NICHD NIH HHS K12 HD105250
6 · The paper itself

Abstract

Juvenile dermatomyositis (JDM) is a rare autoimmune condition with insufficient biomarkers and treatments, in part, due to incomplete knowledge of the cell types mediating disease. We investigated immunophenotypes and cell-specific genes associated with disease activity using multiplexed RNA and protein single-cell sequencing applied to PBMCs from 4 treatment-naïve JDM (TN-JDM) subjects at baseline, 2, 4, and 6 months post-treatment and 4 subjects with inactive disease on treatment. Analysis of 55,564 cells revealed separate clustering of TN-JDM cells within monocyte, NK, CD8

Indexed as

DermatomyositisMyositisB-LymphocytesHumansLeukocytes, MononuclearProteomicsautoimmune diseasedermatomyositisimmune phenotypingjuvenile dermatomyositis (JDM)omicsprecision medicinesingle-cell sequencing

Identifiers

PMID35799782
PMCPMC9254730
OpenAlexW4283265257

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.