Evidence map›Paper›PMID 35798818›Full record

Observational studyScientific reports2022

EWAS of post-COVID-19 patients shows methylation differences in the immune-response associated gene, IFI44L, three months after COVID-19 infection.

Yunsung Lee, Espen Riskedal, Karl Trygve Kalleberg, Mette Istre, Andreas Lind, Fridtjof Lund-Johansen, Olaug Reiakvam, Arne V L Søraas, Jennifer R Harris, John Arne Dahl and 2 more

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 2 pooled it
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 2 syntheses or guidelines pooled it, 33 citations in OpenAlex.

  1. Pooled it
  2. Pathophysiological Mechanisms in Long COVID: A Mixed Method Systematic Review.International journal of environmental research and public health · 2024
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  17. UnravelingFrontiers in oncology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Yunsung Lee *Centre for Fertility and Health, Norwegian Institute of Public Health, Skøyen, P.O. box 222, 0213, Oslo, Norway.
Espen Riskedal *Age Labs AS, Gaustadalléen 23A, 0373, Oslo, Norway.
Karl Trygve KallebergAge Labs AS, Gaustadalléen 23A, 0373, Oslo, Norway.
Mette IstreDepartment of Microbiology, Oslo University Hospital Rikshospitalet, 0372, Oslo, Norway.
Andreas LindDepartment of Microbiology, Oslo University Hospital Ullevaal, 0372, Oslo, Norway.
Fridtjof Lund-JohansenDepartment of Immunology, Oslo University Hospital Rikshospitalet, 0372, Oslo, Norway.
Olaug ReiakvamDepartment of Microbiology, Oslo University Hospital Rikshospitalet, 0372, Oslo, Norway.
Arne V L SøraasDepartment of Microbiology, Oslo University Hospital Rikshospitalet, 0372, Oslo, Norway.
Jennifer R HarrisCentre for Fertility and Health, Norwegian Institute of Public Health, Skøyen, P.O. box 222, 0213, Oslo, Norway.
John Arne DahlDepartment of Microbiology, Oslo University Hospital Rikshospitalet, 0372, Oslo, Norway.
Cathrine L HadleyAge Labs AS, Gaustadalléen 23A, 0373, Oslo, Norway. cathrine@agelabs.com.
Astanand JugessurCentre for Fertility and Health, Norwegian Institute of Public Health, Skøyen, P.O. box 222, 0213, Oslo, Norway.
Oslo University Hospital · NONorwegian Institute of Public Health · NOUniversity of Bergen · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although substantial progress has been made in managing COVID-19, it is still difficult to predict a patient's prognosis. We explored the epigenetic signatures of COVID-19 in peripheral blood using data from an ongoing prospective observational study of COVID-19 called the Norwegian Corona Cohort Study. A series of EWASs were performed to compare the DNA methylation profiles between COVID-19 cases and controls three months post-infection. We also investigated differences associated with severity and long-COVID. Three CpGs-cg22399236, cg03607951, and cg09829636-were significantly hypomethylated (FDR < 0.05) in COVID-19 positive individuals. cg03607951 is located in IFI44L which is involved in innate response to viral infection and several systemic autoimmune diseases. cg09829636 is located in ANKRD9, a gene implicated in a wide variety of cellular processes, including the degradation of IMPDH2. The link between ANKRD9 and IMPDH2 is striking given that IMPDHs are considered therapeutic targets for COVID-19. Furthermore, gene ontology analyses revealed pathways involved in response to viruses. The lack of significant differences associated with severity and long-COVID may be real or reflect limitations in sample size. Our findings support the involvement of interferon responsive genes in the pathophysiology of COVID-19 and indicate a possible link to systemic autoimmune diseases.

Indexed as

Autoimmune DiseasesCOVID-19Cohort StudiesDNA MethylationHumansPost-Acute COVID-19 Syndrome

Identifiers

PMID35798818
PMCPMC9261254
OpenAlexW4284894559

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.