Evidence map›Paper›PMID 35794493›Full record

ArticleArchives of virology2022

A novel nepovirus causing a chlorotic fleck disease on common bean (Phaseolus vulgaris L.).

Adane Abraham, Dawit B Kidanemariam, Stephan Winter, H J Vetten

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 97% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 3 countries.

Adane AbrahamDepartment of Biological Sciences and Biotechnology, Botswana International University of Science and Technology, Private Bag 16, Palapye, Botswana.ORCID http://orcid.org/0000-0002-3866-780X
Dawit B KidanemariamDepartment of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa.ORCID http://orcid.org/0000-0003-1626-6367
Stephan WinterPlant Virus Department, Leibniz-Institute DSMZ-German Collection of Microorganisms and Cell Culture, Braunschweig, Germany.ORCID http://orcid.org/0000-0003-0309-9934
H J Vetten, Im Spargelfeld 1, 38162, Cremlingen, Germany.ORCID http://orcid.org/0000-0003-3375-2180
Botswana International University of Science and Technology · BWLeibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures · DESpiegel Institut (Germany) · DEUniversity of Pretoria · ZA

Funding

Alexander von Humboldt-Stiftung Alexander von Humboldt-StiftungFederal Ministry for Economic Cooperation and Development Federal Ministry for Economic Cooperation and Development
6 · The paper itself

Abstract

Two common bean leaf samples from Ethiopia that had shown chlorotic fleck and veinal mosaic symptoms but tested ELISA-negative for known viruses were mechanically transmitted to herbaceous hosts to obtain virus isolates ET-773/4 and ET-779. Virus purification from Chenopodium quinoa systemically infected with ET-773/4 yielded icosahedral particles measuring ~ 30 nm in diameter and containing a single capsid protein of ~ 58 kDa, suggesting a nepovirus infection. Analysis of nucleotide sequences generated from RNA1 and RNA2 of the isolates indicated that they represent a distinct virus species in the genus Nepovirus. Surprisingly, the most closely related sequence in the GenBank database was that of Hobart nepovirus 3, an incompletely described metagenomic sequence obtained from honey bees in Tasmania. This new nepovirus from Ethiopia is provisionally named "bean chlorotic fleck virus".

Indexed as

BegomovirusNepovirusPhaseolusAnimalsPhylogenyPlant DiseasesZinc Phosphate CementFlecksZinc Phosphate Cement

Identifiers

PMID35794493
OpenAlexW4284891077

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.