Evidence map›Paper›PMID 35792852›Full record

ArticleGenetics2022

The Caenorhabditis elegans ASPP homolog APE-1 is a junctional protein phosphatase 1 modulator.

Gwendolyn M Beacham, Derek T Wei, Erika Beyrent, Ying Zhang, Jian Zheng, Mari M K Camacho, Laurence Florens, Gunther Hollopeter

Open access · greenAbstract read
In one paragraph

Article in Genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  5. Dimerization activates the Inversin complex inMolecular biology of the cell · 2024
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  6. SEM-2/SoxC regulates multiple aspects ofbioRxiv : the preprint server for biology · 2024
    Article
  7. Article
  8. bioRxiv : the preprint server for biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Gwendolyn M BeachamDepartment of Molecular Medicine, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0001-7158-6887
Derek T WeiDepartment of Molecular Medicine, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0001-6510-4458
Erika BeyrentDepartment of Molecular Medicine, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0003-2949-1547
Ying ZhangStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Jian ZhengDepartment of Molecular Medicine, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0001-6128-026X
Mari M K CamachoDepartment of Molecular Medicine, Cornell University, Ithaca, NY 14853, USA.
Laurence FlorensStowers Institute for Medical Research, Kansas City, MO 64110, USA.ORCID 0000-0002-9310-6650
Gunther HollopeterDepartment of Molecular Medicine, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-6409-0530
Cornell University · USStowers Institute for Medical Research · US

Funding

ChimeraX -- Next Generation Visualization and Analysis Software for Multiscale ModelingR01GM129325 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2018 to 2025
$5.2M
Molecular regulation of the AP2 clathrin adaptor complexR01GM127548 · NIGMS · CORNELL UNIVERSITY · PI HOLLOPETER, GUNTHER · 2019 to 2023
$2.1M
Broad wavelength range Zeiss 780 NLO/confocal system for the Cornell Imaging CoreS10OD018516 · OD · CORNELL UNIVERSITY · PI ZIPFEL, WARREN R · 2014 to 2014
$834k
NIGMS NIH HHS R01 GM127548NIGMS NIH HHS R01 GM129325NIH HHS S10 OD018516
6 · The paper itself

Abstract

How serine/threonine phosphatases are spatially and temporally tuned by regulatory subunits is a fundamental question in cell biology. Ankyrin repeat, SH3 domain, proline-rich-region-containing proteins are protein phosphatase 1 catalytic subunit binding partners associated with cardiocutaneous diseases. Ankyrin repeat, SH3 domain, proline-rich-region-containing proteins localize protein phosphatase 1 catalytic subunit to cell-cell junctions, but how ankyrin repeat, SH3 domain, proline-rich-region-containing proteins localize and whether they regulate protein phosphatase 1 catalytic subunit activity in vivo is unclear. Through a Caenorhabditis elegans genetic screen, we find that loss of the ankyrin repeat, SH3 domain, proline-rich-region-containing protein homolog, APE-1, suppresses a pathology called "jowls," providing us with an in vivo assay for APE-1 activity. Using immunoprecipitations and mass spectrometry, we find that APE-1 binds the protein phosphatase 1 catalytic subunit called GSP-2. Through structure-function analysis, we discover that APE-1's N-terminal half directs the APE-1-GSP-2 complex to intercellular junctions. Additionally, we isolated mutations in highly conserved residues of APE-1's ankyrin repeats that suppress jowls yet do not preclude GSP-2 binding, implying APE-1 does more than simply localize GSP-2. Indeed, in vivo reconstitution of APE-1 suggests the ankyrin repeats modulate phosphatase output, a function we find to be conserved among vertebrate homologs.

Indexed as

Caenorhabditis elegansHominidaeAnimalsProlineProtein BindingProtein Phosphatase 1Proteinssrc Homology DomainsProlineProtein Phosphatase 1ProteinsepidermisGSP-2hypodermisintercellular junctionsInversinMLT-4moltingPP1seam cell

Identifiers

PMID35792852
PMCPMC9434228
OpenAlexW4283837104

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.