ArticleBMC plant biology2022
Genome-wide analysis of citrus TCP transcription factors and their responses to abiotic stresses.
Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed.
- Functional Characterization of the Oat (International journal of molecular sciences · 2026Article
- Heavy fruit load inhibits axillary bud outgrowth initially through weakening its sink strength and auxin efflux in citrus.Plant molecular biology · 2026Article
- Genome-wide identification, classification, and expression pattern analysis of the TCP transcription factor family in carrot.Frontiers in plant science · 2026Article
- Identification and characterization of TCP transcription factor GmTCP670 associated with soybean development.Scientific reports · 2025Article
- Systematic Analysis of thePlants (Basel, Switzerland) · 2025Article
- Genome-wide identification of oatFrontiers in genetics · 2025Article
- Identification and expression responses of TCP gene family inFrontiers in plant science · 2025Article
- Identification and Expression Analysis of TCP Transcription Factors Under Abiotic Stress inPlants (Basel, Switzerland) · 2024Article
- Amaranth's Growth and Physiological Responses to Salt Stress and the Functional Analysis ofInternational journal of molecular sciences · 2024Article
- Genome-wide analysis and expression profile of3 Biotech · 2024Article
- Sweet cherry TCP gene family analysis reveals potential functions of PavTCP1, PavTCP2 and PavTCP3 in fruit light responses.BMC genomics · 2024Article
- Class I TCP in fruit development: much more than growth.Frontiers in plant science · 2024Review
- Genome-wide characterization of TCP family and their potential roles in abiotic stress resistance of oat (Frontiers in plant science · 2024Article
- Genome-wide identification and characterization of TCP gene family inFrontiers in plant science · 2024Article
- Comparative Transcriptome Analysis ofPlants (Basel, Switzerland) · 2023Article
- Genome-wide identification, classification, and characterization of lectin gene superfamily in sweet orange (Citrus sinensis L.).PloS one · 2023Article
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Authors and funding
7 authors.
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No grant is acknowledged in the PubMed record.
Abstract
backgroundCitrus is one of the most important fruit crops in the world, and it is worthy to conduct more research on artificially controlling citrus plant growth and development to adapt to different cultivation patterns and environmental conditions. The plant-specific TEOSINTE BRANCHED1, CYCOLOIDEA, and PROLIFERATING CELL FACTORS (TCP) transcription factors are crucial regulators controlling plant growth and development, as well as responding to abiotic stresses. However, the information about citrus TCP transcription factors remains unclear.
resultsIn this study, twenty putative TCP genes (CsTCPs) with the TCP domain were explored from Citrus sinensis genome, of which eleven (CsTCP3, - 4, - 5, - 6, - 10, - 11, - 15, - 16, - 18, - 19, - 20), five (CsTCP1, - 2, - 7, - 9, - 13), and four genes (CsTCP8, - 12, - 14, - 17) were unevenly distributed on chromosomes and divided into three subclades. Cis-acting element analysis indicated that most CsTCPs contained many phytohormone- and environment-responsive elements in promoter regions. All of CsTCPs were predominantly expressed in vegetative tissues or organs (stem, leaf, thorn, and bud) instead of reproductive tissues or organs (flower, fruit, and seed). Combined with collinearity analysis, CsTCP3, CsTCP9, and CsTCP13 may take part in leaf development; CsTCP12 and CsTCP14 may function in shoot branching, leaf development, or thorn development; CsTCP15 may participate in the development of stem, leaf, or thorn. In mature leaf, transcript levels of two CsTCPs (CsTCP19, - 20) were significantly increased while transcript levels of eight CsTCPs (CsTCP2, - 5, - 6, - 7, - 8, - 9, - 10, - 13) were significantly decreased by shading; except for two CsTCPs (CsTCP11, - 19), CsTCPs' transcript levels were significantly influenced by low temperature; moreover, transcript levels of two CsTCPs (CsTCP11, - 12) were significantly increased while five CsTCPs' (CsTCP14, - 16, - 18, - 19, - 20) transcript levels were significantly reduced by drought.
conclusionsThis study provides significant clues for research on roles of CsTCPs in regulating citrus plant growth and development, as well as responding to abiotic stresses.
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