Evidence map›Paper›PMID 35790543›Full record

ReviewTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2022

Breeding for disease resistance in soybean: a global perspective.

Feng Lin, Sushil Satish Chhapekar, Caio Canella Vieira, Marcos Paulo Da Silva, Alejandro Rojas, Dongho Lee, Nianxi Liu, Esteban Mariano Pardo, Yi-Chen Lee, Zhimin Dong and 6 more

Erratum issuedOpen access · hybridAbstract readReview
In one paragraph

Review in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 55 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed, 1 pooled it
28.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 1 synthesis or guideline pooled it, 141 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Association Mapping of Seedling Resistance toPlants (Basel, Switzerland) · 2026
    Article
  5. Article
  6. RenSeq-derived SNPs used in mapping resistance toMolecular breeding : new strategies in plant improvement · 2026
    Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. A balance between glycitein and glyceollins governed by isoflavone 6-hydroxylase confers soybean resistance toProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  16. Review
  17. Article
  18. Identification of candidate genes associated with resistance to Heterodera sojae in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 3 countries.

Feng Lin *Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, 48824, USA.ORCID http://orcid.org/0000-0001-7491-4444
Sushil Satish Chhapekar *Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri-Columbia, Columbia, MO, 65211, USA.ORCID http://orcid.org/0000-0002-9802-884X
Caio Canella Vieira *Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri-Columbia, Columbia, MO, 65211, USA.ORCID http://orcid.org/0000-0001-5428-3753
Marcos Paulo Da Silva *Department of Entomology and Plant Pathology, University of Arkansas, Fayetteville, AR, 72701, USA.ORCID http://orcid.org/0000-0002-8842-3758
Alejandro Rojas *Department of Entomology and Plant Pathology, University of Arkansas, Fayetteville, AR, 72701, USA.ORCID http://orcid.org/0000-0001-5492-5963
Dongho Lee *Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri-Columbia, Columbia, MO, 65211, USA.
Nianxi Liu *Soybean Research Institute, Jilin Academy of Agricultural Sciences, Changchun,, 130033, Jilin, China.ORCID http://orcid.org/0000-0002-5918-4727
Esteban Mariano Pardo *Instituto de Tecnología Agroindustrial del Noroeste Argentino (ITANOA) [Estación Experimental Agroindustrial Obispo Colombres (EEAOC) - Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)], Av. William Cross 3150, C.P. T4101XAC, Las Talitas, Tucumán, Argentina.ORCID http://orcid.org/0000-0001-6777-0307
Yi-Chen LeeFisher Delta Research Center, University of Missouri, Portageville, MO, 63873, USA.
Zhimin DongSoybean Research Institute, Jilin Academy of Agricultural Sciences, Changchun,, 130033, Jilin, China.
Jose Baldin PinheiroDepartamento de Genética, Escola Superior de Agricultura "Luiz de Queiroz" (ESALQ/USP), PO Box 9, Piracicaba, SP, 13418-900, Brazil.ORCID http://orcid.org/0000-0003-1294-2081
Leonardo Daniel PloperInstituto de Tecnología Agroindustrial del Noroeste Argentino (ITANOA) [Estación Experimental Agroindustrial Obispo Colombres (EEAOC) - Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)], Av. William Cross 3150, C.P. T4101XAC, Las Talitas, Tucumán, Argentina.ORCID http://orcid.org/0000-0001-9032-4479
John RupeDepartment of Entomology and Plant Pathology, University of Arkansas, Fayetteville, AR, 72701, USA.
Pengyin ChenDivision of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri-Columbia, Columbia, MO, 65211, USA. chenpe@missouri.edu.
Dechun WangDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, 48824, USA. wangdech@msu.edu.ORCID http://orcid.org/0000-0001-7322-7837
Henry T NguyenDivision of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri-Columbia, Columbia, MO, 65211, USA. nguyenhenry@missouri.edu.ORCID http://orcid.org/0000-0002-7597-1800
Delta Air Lines (United States) · USUniversity of Arkansas at Fayetteville · USConsejo Nacional de Investigaciones Científicas y Técnicas · ARJilin Academy of Agricultural Sciences · CNMichigan State University · USUniversity of Missouri · US

Funding

AgBioResearch, Michigan State University MICL02013Agencia Nacional de Promoción Científica y Tecnológica 2016-0098Department of Science and Technology of Jilin Province 20200201136JCEstación Experimental Agroindustrial Obispo Colombres 2005-35332Jilin Scientific and Technological Development Program 20200201136JCNational Institute of Food and Agriculture Hatch project 1011788National Institute of Food and Agriculture Hatch project 1017862Plataforma BiotecSur-UE, Proyecto BiotecSojaSur I 127119Postdoctoral Research Foundation of China 2019M661234United Soybean Board 2120-172-0153
6 · The paper itself

Abstract

key messageThis review provides a comprehensive atlas of QTLs, genes, and alleles conferring resistance to 28 important diseases in all major soybean production regions in the world. Breeding disease-resistant soybean [Glycine max (L.) Merr.] varieties is a common goal for soybean breeding programs to ensure the sustainability and growth of soybean production worldwide. However, due to global climate change, soybean breeders are facing strong challenges to defeat diseases. Marker-assisted selection and genomic selection have been demonstrated to be successful methods in quickly integrating vertical resistance or horizontal resistance into improved soybean varieties, where vertical resistance refers to R genes and major effect QTLs, and horizontal resistance is a combination of major and minor effect genes or QTLs. This review summarized more than 800 resistant loci/alleles and their tightly linked markers for 28 soybean diseases worldwide, caused by nematodes, oomycetes, fungi, bacteria, and viruses. The major breakthroughs in the discovery of disease resistance gene atlas of soybean were also emphasized which include: (1) identification and characterization of vertical resistance genes reside rhg1 and Rhg4 for soybean cyst nematode, and exploration of the underlying regulation mechanisms through copy number variation and (2) map-based cloning and characterization of Rps11 conferring resistance to 80% isolates of Phytophthora sojae across the USA. In this review, we also highlight the validated QTLs in overlapping genomic regions from at least two studies and applied a consistent naming nomenclature for these QTLs. Our review provides a comprehensive summary of important resistant genes/QTLs and can be used as a toolbox for soybean improvement. Finally, the summarized genetic knowledge sheds light on future directions of accelerated soybean breeding and translational genomics studies.

Indexed as

Disease ResistanceGlycine maxDNA Copy Number VariationsGenomics

Identifiers

PMID35790543
PMCPMC9729162
OpenAlexW4284689410

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.