Evidence map›Paper›PMID 35789861›Full record

ArticleiScience2022

Gene copy number and negative feedback differentially regulate transcriptional variability of segmentation clock genes.

Oriana Q H Zinani, Kemal Keseroğlu, Supravat Dey, Ahmet Ay, Abhyudai Singh, Ertuğrul M Özbudak

Open access · goldAbstract read
In one paragraph

Article in iScience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Regulation of Transcriptional Bursting and Spatial Patterning in EarlybioRxiv : the preprint server for biology · 2025
    Article
  3. Article
  4. Oscillatory control of embryonic development.Development (Cambridge, England) · 2024
    Review
  5. Review
  6. Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Oriana Q H ZinaniDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH 45229, USA.
Kemal KeseroğluDivision of Developmental Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA.
Supravat DeyDepartment of Electrical and Computer Engineering, Biomedical Engineering and Mathematical Sciences, University of Delaware, Newark, DE 19716, USA.
Ahmet AyDepartments of Biology and Mathematics, Colgate University, Hamilton, NY 13346, USA.
Abhyudai SinghDepartment of Electrical and Computer Engineering, Biomedical Engineering and Mathematical Sciences, University of Delaware, Newark, DE 19716, USA.
Ertuğrul M ÖzbudakDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH 45229, USA.
Cincinnati Children's Hospital Medical Center · USUniversity of Delaware · USColgate University · US

Funding

Regulatory Mechanisms Governing Precision in Vertebral SegmentationR35GM140805 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Ertugrul M Ozbudak · 2021 to 2026
$3.1M
NIGMS NIH HHS R35 GM140805
6 · The paper itself

Abstract

Timely progression of a genetic program is critical for embryonic development. However, gene expression involves inevitable fluctuations in biochemical reactions leading to substantial cell-to-cell variability (gene expression noise). One of the important questions in developmental biology is how pattern formation is reproducibly executed despite these unavoidable fluctuations in gene expression. Here, we studied the transcriptional variability of two paired zebrafish segmentation clock genes (

Indexed as

Biological sciencesChronobiologyDevelopmental biology

Identifiers

PMID35789861
PMCPMC9250017
OpenAlexW4283826824

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.