Evidence map›Paper›PMID 35788288›Full record

ArticleJournal of experimental botany2022

A weak allele of OsNRAMP5 confers moderate cadmium uptake while avoiding manganese deficiency in rice.

Masato Kuramata, Tadashi Abe, Hachidai Tanikawa, Kazuhiko Sugimoto, Satoru Ishikawa

Abstract read
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In one paragraph

Article in Journal of experimental botany, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

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  14. A weak allele of OsNRAMP5 for safer rice.Journal of experimental botany · 2022
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Masato KuramataInstitute for Agro-Environmental Sciences, National Agriculture and Food Research Organization (NARO), Tsukuba, Japan.
Tadashi AbeInstitute for Agro-Environmental Sciences, National Agriculture and Food Research Organization (NARO), Tsukuba, Japan.
Hachidai TanikawaInstitute for Agro-Environmental Sciences, National Agriculture and Food Research Organization (NARO), Tsukuba, Japan.
Kazuhiko SugimotoInstitute of Crop Sciences, NARO, Tsukuba, Japan.
Satoru IshikawaInstitute for Agro-Environmental Sciences, National Agriculture and Food Research Organization (NARO), Tsukuba, Japan.ORCID 0000-0002-6155-3050
National Agriculture and Food Research Organization · JPInstitute of Crop Science · JP

Funding

Bio-oriented Technology Research Advancement Institution JPJ007097
6 · The paper itself

Abstract

Decreasing cadmium (Cd) concentrations in rice grains can effectively reduce potential risks to human health because rice is the major contributor to Cd intake in many diets. Among several genes involved in rice Cd accumulation, the loss of function of OsNRAMP5 is known to be effective in reducing grain concentration by inhibiting root uptake. However, disruption of this gene simultaneously decreases manganese (Mn) uptake because OsNRAMP5 is a major Mn transporter. With the aim of improving Mn uptake in OsNRAMP5 mutants while still restricting the grain Cd concentration below the upper limit of international standards, we identified a novel OsNRAMP5 allele encoding a protein in which glutamine (Q) at position 337 was replaced by lysine (K). The mutant carrying the OsNRAMP5-Q337K allele showed intermediate Cd and Mn accumulation between that of the wild-type and OsNRAMP5-knockout lines, and exhibited more resistance to Mn deficiency than the knockout lines. Different amino acid substitutions at position Q337 significantly affected the Cd and Mn transport activity in yeast cells, indicating that it is one of the crucial sites for OsNRAMP5 function. Our results suggest that the OsNRAMP5-Q337K allele might be useful for reducing grain Cd concentrations without causing severe Mn deficiency in rice cultivars through DNA marker-assisted breeding.

Indexed as

CadmiumOryzaSoil PollutantsAllelesEdible GrainGenetic MarkersGlutamineLysineManganesePlant BreedingPlant ProteinsCadmiumGenetic MarkersGlutamineLysineManganesePlant ProteinsSoil PollutantsCadmiumDNA marker-assisted breedingfood safetymanganesemetal transport activityOryza sativaOsNRAMP5riceTILLING

Identifiers

PMID35788288
OpenAlexW4283838259

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.