Evidence map›Paper›PMID 35788277›Full record

ReviewBriefings in bioinformatics2022

Application of non-negative matrix factorization in oncology: one approach for establishing precision medicine.

Ryuji Hamamoto, Ken Takasawa, Hidenori Machino, Kazuma Kobayashi, Satoshi Takahashi, Amina Bolatkan, Norio Shinkai, Akira Sakai, Rina Aoyama, Masayoshi Yamada and 5 more

Abstract readReview
In one paragraph

Review in Briefings in bioinformatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Review
  11. Fairer non-negative matrix factorization.Frontiers in big data · 2026
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Ryuji HamamotoNational Cancer Center Research Institute.ORCID 0000-0002-2632-1334
Ken TakasawaRIKEN Center for Advanced Intelligence Project.
Hidenori MachinoRIKEN Center for Advanced Intelligence Project.
Kazuma KobayashiNational Cancer Center Research Institute.
Satoshi TakahashiRIKEN Center for Advanced Intelligence Project.
Amina BolatkanRIKEN Center for Advanced Intelligence Project.
Norio ShinkaiTokyo Medical and Dental University.
Akira SakaiTokyo Medical and Dental University.
Rina AoyamaShowa University Graduate School of Medicine School of Medicine.
Masayoshi YamadaNational Cancer Center Hospital.
Ken AsadaRIKEN Center for Advanced Intelligence Project.
Masaaki KomatsuRIKEN Center for Advanced Intelligence Project.
Koji OkamotoNational Cancer Center Research Institute.
Hirokazu KameokaNTT Communication Science Laboratories.
Syuzo KanekoNational Cancer Center Research Institute.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The increase in the expectations of artificial intelligence (AI) technology has led to machine learning technology being actively used in the medical field. Non-negative matrix factorization (NMF) is a machine learning technique used for image analysis, speech recognition, and language processing; recently, it is being applied to medical research. Precision medicine, wherein important information is extracted from large-scale medical data to provide optimal medical care for every individual, is considered important in medical policies globally, and the application of machine learning techniques to this end is being handled in several ways. NMF is also introduced differently because of the characteristics of its algorithms. In this review, the importance of NMF in the field of medicine, with a focus on the field of oncology, is described by explaining the mathematical science of NMF and the characteristics of the algorithm, providing examples of how NMF can be used to establish precision medicine, and presenting the challenges of NMF. Finally, the direction regarding the effective use of NMF in the field of oncology is also discussed.

Indexed as

Artificial IntelligencePrecision MedicineAlgorithmsMachine Learningmachine learningmeta-analysisNMFomics analysissingle-cell analysis

Identifiers

PMID35788277
PMCPMC9294421

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.