Evidence map›Paper›PMID 35787971›Full record

ArticleMolecular genetics and metabolism2022

A rapid and non-invasive proteomic analysis using DBS and buccal swab for multiplexed second-tier screening of Pompe disease and Mucopolysaccharidosis type I.

Tong Zhang, Phi Duong, Remwilyn Dayuha, Christopher J Collins, Erika Beckman, Jenny Thies, Irene Chang, Christina Lam, Angela Sun, Anna I Scott and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular genetics and metabolism, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
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  5. Article
  6. Article
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  8. Review
  9. Proteomics in Inherited Metabolic Disorders.International journal of molecular sciences · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Tong ZhangSeattle Children's Research Institute, Seattle, WA, United States of America.
Phi DuongSeattle Children's Research Institute, Seattle, WA, United States of America.
Remwilyn DayuhaSeattle Children's Research Institute, Seattle, WA, United States of America.
Christopher J CollinsSeattle Children's Research Institute, Seattle, WA, United States of America.
Erika BeckmanDivision of Genetic Medicine, Seattle Children's Hospital, Seattle, WA, United States of America.
Jenny ThiesDivision of Genetic Medicine, Seattle Children's Hospital, Seattle, WA, United States of America.
Irene ChangBiochemical Genetics Clinic, Seattle Children's Hospital, Seattle, WA, United States of America; Department of Pediatrics, Division of Genetic Medicine, University of Washington School of Medicine, Seattle, WA, United States of America.
Christina LamBiochemical Genetics Clinic, Seattle Children's Hospital, Seattle, WA, United States of America; Department of Pediatrics, Division of Genetic Medicine, University of Washington School of Medicine, Seattle, WA, United States of America.
Angela SunBiochemical Genetics Clinic, Seattle Children's Hospital, Seattle, WA, United States of America; Department of Pediatrics, Division of Genetic Medicine, University of Washington School of Medicine, Seattle, WA, United States of America.
Anna I ScottDepartment of Laboratory, Seattle Children's Hospital, Seattle, WA, United States of America.
John ThompsonWA State Department of Health, Seattle, WA, United States of America.
Aranjeet SinghWA State Department of Health, Seattle, WA, United States of America.
Hamid KhalediDepartment of Chemistry, University of Washington, Seattle, WA, United States of America.
Michael H GelbDepartment of Chemistry, University of Washington, Seattle, WA, United States of America.
Si Houn HahnSeattle Children's Research Institute, Seattle, WA, United States of America; Biochemical Genetics Clinic, Seattle Children's Hospital, Seattle, WA, United States of America; Department of Pediatrics, Division of Genetic Medicine, University of Washington School of Medicine, Seattle, WA, United States of America. Electronic address: sihoun.hahn@seattlechildrens.org.
Seattle Children's Hospital · USUniversity of Washington · USWashington State Department of Health · US

Funding

Multiplex Analysis of Inborn Errors of MetabolismR01DK067859 · NIDDK · UNIVERSITY OF WASHINGTON · PI GELB, MICHAEL H · 2003 to 2025
$9.8M
Multiplex Proteomic Analysis for Next-Generation Newborn Screening of Wilson Disease, Cystinosis, and Primary ImmunodeficienciesR01HD098180 · NICHD · SEATTLE CHILDREN'S HOSPITAL · PI HAHN, SIHOUN · 2019 to 2022
$2.2M
NICHD NIH HHS R01 HD098180NIDDK NIH HHS R01 DK067859
6 · The paper itself

Abstract

purposeCurrent newborn screening programs for Pompe disease (PD) and mucopolysaccharidosis type I (MPS I) suffer from a high false positive rate and long turnaround time for clinical follow up. This study aimed to develop a novel proteomics-based assay for rapid and accurate second-tier screening of PD and MPS I. A fast turnaround assay would enable the identification of severe cases who need immediate clinical follow up and treatment.

methodsWe developed an immunocapture coupled with mass spectrometry-based proteomics (Immuno-SRM) assay to quantify GAA and IDUA proteins in dried blood spots (DBS) and buccal swabs. Sensitivity, linearity, reproducibility, and protein concentration range in healthy control samples were determined. Clinical performance was evaluated in known PD and MPS I patients as well as pseudodeficiency and carrier cases.

resultsUsing three 3.2 mm punches (~13.1 μL of blood) of DBS, the assay showed reproducible and sensitive quantification of GAA and IDUA. Both proteins can also be quantified in buccal swabs with high reproducibility and sensitivity. Infantile onset Pompe disease (IOPD) and severe MPS I cases are readily identifiable due to the absence of GAA and IDUA, respectively. In addition, late onset Pompe disease (LOPD) and attenuated MPS I patients showed much reduced levels of the target protein. By contrast, pseudodeficiency and carrier cases exhibited significant higher target protein levels compared to true patients.

conclusionDirect quantification of endogenous GAA and IDUA peptides in DBS by Immuno-SRM can be used for second-tier screening to rapidly identify severe PD and MPS I patients with a turnaround time of <1 week. Such patients could benefit from immediate clinical follow up and possibly earlier treatment.

Indexed as

Glycogen Storage Disease Type IIMucopolysaccharidosis IHumansInfant, NewbornNeonatal ScreeningProteomicsReproducibility of ResultsBuccal swabDBSHurler syndromeMucopolysaccharidosis type IPompe diseaseProteomic analysis

Identifiers

PMID35787971
PMCPMC10387444
OpenAlexW4283691216

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.