Evidence map›Paper›PMID 35787790›Full record

ArticleGenetics, selection, evolution : GSE2022

A genome-wide screen for resilient responses in growing pigs.

Houda Laghouaouta, Lorenzo Fraile, Rafael Suárez-Mesa, Roger Ros-Freixedes, Joan Estany, Ramona Natacha Pena

Open access · goldAbstract read
In one paragraph

Article in Genetics, selection, evolution : GSE, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Sequence variants associated with resilient responses in growing pigs.Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie · 2025
    Article
  3. Selection for Resilience in Livestock Production Systems.International journal of molecular sciences · 2024
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Houda LaghouaoutaDepartment of Animal Science, University of Lleida-Agrotecnio-CERCA Center, 25198, Lleida, Catalonia, Spain.
Lorenzo FraileDepartment of Animal Science, University of Lleida-Agrotecnio-CERCA Center, 25198, Lleida, Catalonia, Spain.
Rafael Suárez-MesaDepartment of Animal Science, University of Lleida-Agrotecnio-CERCA Center, 25198, Lleida, Catalonia, Spain.
Roger Ros-FreixedesDepartment of Animal Science, University of Lleida-Agrotecnio-CERCA Center, 25198, Lleida, Catalonia, Spain.
Joan EstanyDepartment of Animal Science, University of Lleida-Agrotecnio-CERCA Center, 25198, Lleida, Catalonia, Spain.
Ramona Natacha PenaDepartment of Animal Science, University of Lleida-Agrotecnio-CERCA Center, 25198, Lleida, Catalonia, Spain. romi.pena@udl.cat.ORCID http://orcid.org/0000-0002-3558-7302
Universitat de Lleida · ES

Funding

Interreg RTI2018-097700-B-I00Ministerio de Ciencia, Innovación y Universidades RTI2018-097700-B-I00
6 · The paper itself

Abstract

backgroundThere is a growing interest to decipher the genetic background of resilience and its possible improvement through selective breeding. The objective of the present study was to provide new insights into the genetic make-up of resilience in growing pigs by identifying genomic regions and candidate genes associated with resilience indicators. Commercial Duroc pigs were challenged with an attenuated Aujeszky vaccine at 12 weeks of age. Two resilience indicators were used: deviation from the expected body weight at 16 weeks of age given the growth curve of non-vaccinated pigs (∆BW) and the increase in acute-phase protein haptoglobin at four days post-vaccination (∆HP). Genome-wide association analyses were carried out on 445 pigs, using genotypes at 41,165 single nucleotide polymorphisms (SNPs) and single-marker and Bayesian multiple-marker regression approaches.

resultsGenomic regions on pig chromosomes 2, 8, 9, 11 (∆BW) and 8, 9, 13 (∆HP) were found to be associated with the resilience indicators and explained high proportions of their genetic variance. The genomic regions that were associated explained 27 and 5% of the genetic variance of ∆BW and ∆HP, respectively. These genomic regions harbour promising candidate genes that are involved in pathways related to immune response, response to stress, or signal transduction (CD6, PTGDR2, IKZF1, RNASEL and MYD88), and growth (GRB10 and LCORL).

conclusionsOur study identified novel genomic regions that are associated with two resilience indicators (∆BW and ∆HP) in pigs. These associated genomic regions harbour potential candidate genes involved in immune response and growth pathways, which emphasise the strong relationship between resilience and immune response.

Indexed as

GenomeGenome-Wide Association StudyAnimalsBayes TheoremBody WeightGenomicsPolymorphism, Single NucleotideSwine

Identifiers

PMID35787790
PMCPMC9251948
OpenAlexW4283791161

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.