Evidence map›Paper›PMID 35787236›Full record

ArticleEmerging microbes & infections2022

Pulmonary lesions following inoculation with the SARS-CoV-2 Omicron BA.1 (B.1.1.529) variant in Syrian golden hamsters.

Melanie Rissmann, Danny Noack, Debby van Riel, Katharina S Schmitz, Rory D de Vries, Peter van Run, Mart M Lamers, Corine H Geurts van Kessel, Marion P G Koopmans, Ron A M Fouchier and 3 more

Open access · goldAbstract read
In one paragraph

Article in Emerging microbes & infections, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. The Omicron variant of concern: Diversification and convergent evolution in spike protein, and escape from anti-Spike monoclonal antibodies.Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy · 2022
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Melanie RissmannDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.
Danny NoackDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.
Debby van RielDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.
Katharina S SchmitzDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.
Rory D de VriesDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.
Peter van RunDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.ORCID 0000-0001-6963-4165
Mart M LamersDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.ORCID 0000-0002-1431-4022
Corine H Geurts van KesselDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.
Marion P G KoopmansDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.ORCID 0000-0002-5204-2312
Ron A M FouchierDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.
Thijs KuikenDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.
Bart L HaagmansDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.ORCID 0000-0001-6221-2015
Barry RockxDepartment of Viroscience, Erasmus Medical Center, Rotterdam, Netherlands.ORCID 0000-0003-2463-027X
Erasmus MC · NL

Funding

NIAID Centers of Excellence for Influenza Research and Response: Universal Influenza Vaccine Research Activities75N93021C00014 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI GARCIA-SASTRE, ADOLFO · 2021 to 2025
$62.6M
NIAID NIH HHS 75N93021C00014
6 · The paper itself

Abstract

The Omicron BA.1 (B.1.1.529) SARS-CoV-2 variant is characterized by a high number of mutations in the viral genome, associated with immune escape and increased viral spread. It remains unclear whether milder COVID-19 disease progression observed after infection with Omicron BA.1 in humans is due to reduced pathogenicity of the virus or due to pre-existing immunity from vaccination or previous infection. Here, we inoculated hamsters with Omicron BA.1 to evaluate pathogenicity and kinetics of viral shedding, compared to Delta (B.1.617.2) and to animals re-challenged with Omicron BA.1 after previous SARS-CoV-2 614G infection. Omicron BA.1 infected animals showed reduced clinical signs, pathological changes, and viral shedding, compared to Delta-infected animals, but still showed gross- and histopathological evidence of pneumonia. Pre-existing immunity reduced viral shedding and protected against pneumonia. Our data indicate that the observed decrease of disease severity is in part due to intrinsic properties of the Omicron BA.1 variant.

Indexed as

COVID-19SARS-CoV-2AnimalsCricetinaeHumansMesocricetusVaccinationDeltaOmicron BA.1pathologypre-existing immunityre-challengeSARS-CoV-2Syrian golden hamster

Identifiers

PMID35787236
PMCPMC9295819
OpenAlexW4283821657

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.