Evidence map›Paper›PMID 35785511›Full record

ArticleChembiochem : a European journal of chemical biology2022

A High-Throughput Continuous Spectroscopic Assay to Measure the Activity of Natural Product Methyltransferases.

Hadas Simon-Baram, Steffen Roth, Christina Niedermayer, Patricia Huber, Melanie Speck, Julia Diener, Michael Richter, Shimon Bershtein

Open access · hybridAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Hadas Simon-BaramDepartment of Life Sciences, Ben-Gurion University of the Negev, Ben-Gurion blvd 1, 8410501, Beer-Sheva, Israel.
Steffen RothFraunhofer Institute for Interfacial Engineering and Biotechnology (IGB), Branch BioCat, Schulgasse 11a, 94315, Straubing, Germany.
Christina NiedermayerFraunhofer Institute for Interfacial Engineering and Biotechnology (IGB), Branch BioCat, Schulgasse 11a, 94315, Straubing, Germany.
Patricia HuberFraunhofer Institute for Interfacial Engineering and Biotechnology (IGB), Branch BioCat, Schulgasse 11a, 94315, Straubing, Germany.
Melanie SpeckFraunhofer Institute for Interfacial Engineering and Biotechnology (IGB), Branch BioCat, Schulgasse 11a, 94315, Straubing, Germany.
Julia DienerFraunhofer Institute for Interfacial Engineering and Biotechnology (IGB), Branch BioCat, Schulgasse 11a, 94315, Straubing, Germany.
Michael RichterFraunhofer Institute for Interfacial Engineering and Biotechnology (IGB), Branch BioCat, Schulgasse 11a, 94315, Straubing, Germany.
Shimon BershteinDepartment of Life Sciences, Ben-Gurion University of the Negev, Ben-Gurion blvd 1, 8410501, Beer-Sheva, Israel.ORCID 0000-0003-4322-1025
Fraunhofer Institute for Interfacial Engineering and Biotechnology · DEBen-Gurion University of the Negev · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Natural product methyltransferases (NPMTs) represent an emerging class of enzymes that can be of great use for the structural and functional diversification of bioactive compounds, such as the strategic modification of C-, N-, O- and S-moieties. To assess the activity and the substrate scope of the ever-expanding repertoire of NPMTs, a simple, fast, and robust assay is needed. Here, we report a continuous spectroscopic assay, in which S-adenosyl-L-methionine-dependent methylation is linked to NADH oxidation through the coupled activities of S-adenosyl-L-homocysteine (SAH) deaminase and glutamate dehydrogenase. The assay is highly suitable for a high-throughput evaluation of small molecule methylation and for determining the catalytic parameters of NPMTs under conditions that remove the potent inhibition by SAH. Through the modular design, the assay can be extended to match the needs of different aspects of methyltransferase cascade reactions and respective applications.

Indexed as

Biological ProductsMethyltransferasesHigh-Throughput Screening AssaysMethylationS-AdenosylhomocysteineS-AdenosylmethionineBiological ProductsMethyltransferasesS-AdenosylhomocysteineS-Adenosylmethioninebiocatalysishigh-throughput screeningnatural productssmall molecule methyltransferases

Identifiers

PMID35785511
PMCPMC9542197
OpenAlexW4283801058

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.