Evidence map›Paper›PMID 35784651›Full record

ArticleCell reports methods2022

A versatile viral toolkit for functional discovery in the nervous system.

Gabrielle Pouchelon, Josselyn Vergara, Justin McMahon, Bram L Gorissen, Jessica D Lin, Douglas Vormstein-Schneider, Jason L Niehaus, Timothy J Burbridge, Jason C Wester, Mia Sherer and 10 more

Abstract read
In one paragraph

Article in Cell reports methods, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Functional specialization of hippocampal somatostatin-expressing interneurons.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Review
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  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Gabrielle PouchelonBroad Institute, Stanley Center for Psychiatric Research, Cambridge, MA 02142, USA.
Josselyn VergaraBroad Institute, Stanley Center for Psychiatric Research, Cambridge, MA 02142, USA.
Justin McMahonBroad Institute, Stanley Center for Psychiatric Research, Cambridge, MA 02142, USA.
Bram L GorissenBroad Institute, Stanley Center for Psychiatric Research, Cambridge, MA 02142, USA.
Jessica D LinBroad Institute, Stanley Center for Psychiatric Research, Cambridge, MA 02142, USA.
Douglas Vormstein-SchneiderBroad Institute, Stanley Center for Psychiatric Research, Cambridge, MA 02142, USA.
Jason L NiehausAddgene, Watertown, MA 02472, USA.
Timothy J BurbridgeBroad Institute, Stanley Center for Psychiatric Research, Cambridge, MA 02142, USA.
Jason C WesterEunice Kennedy Shriver National Institute of Child Health and Human Development, NIH, Bethesda, MD 20892, USA.
Mia ShererBroad Institute, Stanley Center for Psychiatric Research, Cambridge, MA 02142, USA.
Marian Fernandez-OteroBroad Institute, Stanley Center for Psychiatric Research, Cambridge, MA 02142, USA.
Kathryn C AllawayBroad Institute, Stanley Center for Psychiatric Research, Cambridge, MA 02142, USA.
Kenneth PelkeyEunice Kennedy Shriver National Institute of Child Health and Human Development, NIH, Bethesda, MD 20892, USA.
Ramesh ChittajalluEunice Kennedy Shriver National Institute of Child Health and Human Development, NIH, Bethesda, MD 20892, USA.
Chris J McBainEunice Kennedy Shriver National Institute of Child Health and Human Development, NIH, Bethesda, MD 20892, USA.
Melina FanAddgene, Watertown, MA 02472, USA.
Jason S NasseAddgene, Watertown, MA 02472, USA.
Gregg A WildenbergDepartment of Neurobiology, University of Chicago, Chicago, IL 60637, USA.
Gordon FishellBroad Institute, Stanley Center for Psychiatric Research, Cambridge, MA 02142, USA.
Jordane DimidschsteinBroad Institute, Stanley Center for Psychiatric Research, Cambridge, MA 02142, USA.

Funding

Cellular And Synaptic Physiology Of Hippocampal InterneuronsZIAHD001205 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI MCBAIN, CHRIS J. · 2009 to 2025
$45.8M
The role of genetic and activity dependent cues in the generation of 5HT3aR interneuron diversityP01NS074972 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MACHOLD, ROBERT P · 2012 to 2023
$15.5M
Regional and Genetic Diversity of Cortical InterneuronsR01MH071679 · NIMH · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI FISHELL, GORDON J · 2005 to 2020
$8.5M
Development and validation of AAV vectors to manipulate specific neuronal subtypes and circuits involved in epilepsy and psychiatric disorders across mammalian species.UG3MH120096 · NIMH · BROAD INSTITUTE, INC. · PI DEVERMAN, BENJAMIN E, FISHELL, GORDON J · 2019 to 2021
$6.7M
A cellular atlas of the primate and human basal gangliaU01MH124602 · NIMH · BROAD INSTITUTE, INC. · PI CHEN, FEI, FISHELL, GORDON J · 2021 to 2023
$5.0M
The molecular and cellular basis of cortical interneuron divergenceR37MH071679 · NIMH · HARVARD MEDICAL SCHOOL · PI GORDON J FISHELL · 2022 to 2026
$4.1M
Mapping and controlling gene expression in inhibitory interneurons mammalsR01MH111529 · NIMH · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI DIMIDSCHSTEIN, JORDANE · 2016 to 2018
$3.4M
FoxG1 in the Development of Cerebral Cortex and the Adult Neural Niche.R01MH095147 · NIMH · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI FISHELL, GORDON J · 2012 to 2013
$1.2M
NIMH NIH HHS R01 MH071679NIMH NIH HHS R01 MH095147NIMH NIH HHS R01 MH111529NIMH NIH HHS R37 MH071679NIMH NIH HHS U01 MH124602NIMH NIH HHS UG3 MH120096NINDS NIH HHS P01 NS074972
6 · The paper itself

Abstract

The ability to precisely control transgene expression is essential for basic research and clinical applications. Adeno-associated viruses (AAVs) are non-pathogenic and can be used to drive stable expression in virtually any tissue, cell type, or species, but their limited genomic payload results in a trade-off between the transgenes that can be incorporated and the complexity of the regulatory elements controlling their expression. Resolving these competing imperatives in complex experiments inevitably results in compromises. Here, we assemble an optimized viral toolkit (VTK) that addresses these limitations and allows for efficient combinatorial targeting of cell types. Moreover, their modular design explicitly enables further refinements. We achieve this in compact vectors by integrating structural improvements of AAV vectors with innovative molecular tools. We illustrate the potential of this approach through a systematic demonstration of their utility for targeting cell types and querying their biology using a wide array of genetically encoded tools.

Indexed as

Genetic VectorsNervous SystemTransduction, GeneticTransgenesAAVcircuitsneurosciencevector

Identifiers

PMID35784651
PMCPMC9243523

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.