Evidence map›Paper›PMID 35784175›Full record

ArticleMediators of inflammation2022

SNHG5/miR-299-5p/ATF2 Axis as a Biomarker in Immune Microenvironment of Intervertebral Disc Degeneration.

Yu Shi, Rong Guo, Yanyan Zeng, Qian Fang, Xianglong Wang, Wei Liu, Guozhi Huang, Wen Wu

Abstract read
In one paragraph

Article in Mediators of inflammation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yu ShiDepartment of Rehabilitation, Zhujiang Hospital, Southern Medical University, Guangzhou 510282, China.ORCID https://orcid.org/0000-0001-8225-8678
Rong GuoDepartment of Rehabilitation, Zhujiang Hospital, Southern Medical University, Guangzhou 510282, China.
Yanyan ZengDepartment of Rehabilitation, Zhujiang Hospital, Southern Medical University, Guangzhou 510282, China.
Qian FangDepartment of Rehabilitation, Zhujiang Hospital, Southern Medical University, Guangzhou 510282, China.
Xianglong WangDepartment of Rehabilitation, Zhujiang Hospital, Southern Medical University, Guangzhou 510282, China.
Wei LiuDepartment of Rehabilitation, Guangzhou Red Cross Hospital, Jinan University, Guangzhou 510000, China.ORCID https://orcid.org/0000-0002-5606-9838
Guozhi HuangDepartment of Rehabilitation, Zhujiang Hospital, Southern Medical University, Guangzhou 510282, China.
Wen WuDepartment of Rehabilitation, Zhujiang Hospital, Southern Medical University, Guangzhou 510282, China.ORCID https://orcid.org/0000-0002-5576-2999

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methods: The data sets of GSE56081 and GSE63492 in the Gene Expression Omnibus (GEO) database were used for screening and analysis, and the key gene markers were verified by GSE34095 and GSE126883. Finally, the infiltration of immune cells in the data were analyzed by MCPcounter analysis package. Results: In this study, a ceRNA containing 15 lncRNAs, 9 miRNAs, and 103 mRNAs was constructed. After multimodel screening and verification, key gene marker was found, namely, ATF2. The lncRNA/miRNA/mRNA axis closely related to ATF2 have also been found, namely, SNHG5/miR-299-5p/ATF2. In the analysis of immune infiltration, ATF2 was negatively correlated with T cells but positively correlated with neutrophils and endothelial cells. Conclusion: The SNHG5/miR-299-5p/ATF2 can be used as biomarker of IDD, and infiltration of immune cells plays an important role in the pathological development of IDD. In addition, as a marker of IDD, the involvement of the above-mentioned axis in the pathological development of IDD remains to be further explored.

Indexed as

Intervertebral Disc DegenerationMicroRNAsRNA, Long NoncodingActivating Transcription Factor 2BiomarkersEndothelial CellsHumansRNA, MessengerActivating Transcription Factor 2ATF2 protein, humanBiomarkerslong non-coding RNA SNHG5, humanMicroRNAsMIRN299 microRNA, humanRNA, Long NoncodingRNA, Messenger

Identifiers

PMID35784175
PMCPMC9246573

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.