Evidence map›Paper›PMID 35783412›Full record

ArticleFrontiers in microbiology2022

Structure and Protein-Protein Interactions of Ice Nucleation Proteins Drive Their Activity.

Susan Hartmann, Meilee Ling, Lasse S A Dreyer, Assaf Zipori, Kai Finster, Sarah Grawe, Lasse Z Jensen, Stella Borck, Naama Reicher, Taner Drace and 7 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
5.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Hierarchical assembly and environmental enhancement of bacterial ice nucleators.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Functional aggregation of cell-free proteins enables fungal ice nucleation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Article
  15. Expression of Ice Nucleation Protein inFoods (Basel, Switzerland) · 2023
    Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 3 countries.

Susan HartmannInstitute for Tropospheric Research, Leipzig, Germany.
Meilee LingDepartment of Biology, Microbiology Section, Aarhus University, Aarhus, Denmark.
Lasse S A DreyerDepartment of Molecular Biology and Genetics, Section for Protein Science, Aarhus University, Aarhus, Denmark.
Assaf ZiporiDepartment of Earth and Planetary Sciences, Weizmann Institute of Science, Rehovot, Israel.
Kai FinsterDepartment of Biology, Microbiology Section, Aarhus University, Aarhus, Denmark.
Sarah GraweInstitute for Tropospheric Research, Leipzig, Germany.
Lasse Z JensenDepartment of Biology, Microbiology Section, Aarhus University, Aarhus, Denmark.
Stella BorckDepartment of Biology, Microbiology Section, Aarhus University, Aarhus, Denmark.
Naama ReicherDepartment of Earth and Planetary Sciences, Weizmann Institute of Science, Rehovot, Israel.
Taner DraceDepartment of Molecular Biology and Genetics, Section for Protein Science, Aarhus University, Aarhus, Denmark.
Dennis NiedermeierInstitute for Tropospheric Research, Leipzig, Germany.
Nykola C JonesDepartment of Physics and Astronomy, The Institute for Storage Ring Facilities, Aarhus University, Aarhus, Denmark.
Søren V HoffmannDepartment of Physics and Astronomy, The Institute for Storage Ring Facilities, Aarhus University, Aarhus, Denmark.
Heike WexInstitute for Tropospheric Research, Leipzig, Germany.
Yinon RudichDepartment of Earth and Planetary Sciences, Weizmann Institute of Science, Rehovot, Israel.
Thomas BoesenDepartment of Molecular Biology and Genetics, Section for Protein Science, Aarhus University, Aarhus, Denmark.
Tina Šantl-TemkivDepartment of Biology, Microbiology Section, Aarhus University, Aarhus, Denmark.
Aarhus University · DKLeibniz Institute for Tropospheric Research · DEWeizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbially-produced ice nucleating proteins (INpro) are unique molecular structures with the highest known catalytic efficiency for ice formation. Airborne microorganisms utilize these proteins to enhance their survival by reducing their atmospheric residence times. INpro also have critical environmental effects including impacts on the atmospheric water cycle, through their role in cloud and precipitation formation, as well as frost damage on crops. INpro are ubiquitously present in the atmosphere where they are emitted from diverse terrestrial and marine environments. Even though bacterial genes encoding INpro have been discovered and sequenced decades ago, the details of how the INpro molecular structure and oligomerization foster their unique ice-nucleation activity remain elusive. Using machine-learning based software AlphaFold 2 and trRosetta, we obtained and analysed the first

Indexed as

atmospheric bacteriaice-nucleating proteinsprotein activityprotein–protein interactionsprotein structure

Identifiers

PMID35783412
PMCPMC9247515
OpenAlexW4283018332

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.