Evidence map›Paper›PMID 35782101›Full record

ArticlePeerJ2022

The potential of CircRNA1002 as a biomarker in hepatitis B virus-related hepatocellular carcinoma.

Ying Li, Ronghua Li, Da Cheng, Xiaoyu Fu, Lei Fu, Shifang Peng

Abstract read
In one paragraph

Article in PeerJ, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ying LiDepartment of Infectious Diseases, Xiangya Hospital, Central South University, Changsha Hunan, China.
Ronghua LiDepartment of Nuclear Medicine, Xiangya Hospital, Central South University, Changsha Hunan, China.
Da ChengDepartment of Infectious Diseases, Xiangya Hospital, Central South University, Changsha Hunan, China.
Xiaoyu FuDepartment of Infectious Diseases, Xiangya Hospital, Central South University, Changsha Hunan, China.
Lei FuDepartment of Infectious Diseases, Xiangya Hospital, Central South University, Changsha Hunan, China.ORCID 0000-0001-7550-1254
Shifang PengDepartment of Infectious Diseases, Xiangya Hospital, Central South University, Changsha Hunan, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Although hepatocellular carcinoma (HCC) is the most common type of primary liver cancer, there is a lack of effective diagnostic measures. Circular RNAs (circRNAs) can be used as biomarkers for monitoring the occurrence and development of HCC. However, a convenient and reliable serum circRNA biomarker is not currently available. Materials & Methods: CircRNA expression profiles were explored using high-throughput sequencing technology, and targeted circRNAs and mRNAs were validated by quantitative reverse transcription PCR (RT-qPCR). The biological functions of circRNAs were investigated using Gene Ontology (GO) enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. Downstream miRNAs and mRNAs of dysregulated circRNAs were predicted using TargetScan, miRanda, and miRDB; then circRNA-miRNA-mRNA interaction networks were constructed based on sequencing data and the Cancer Genome Atlas (TCGA). Results: A total of 50,327 circRNAs were identified, with 1,187 circRNAs significantly differentially expressed between hepatitis B virus (HBV)-related HCC and HBV asymptomatic carriers. Among these circRNAs, four (circRNA1002, circRNA7941, circRNA 39338, and circRNA44142) were validated by RT-qPCR as being statistically different either in HCC tissue or serum samples. circRNA1002 was significantly down-regulated in both HCC serum and tissue, indicating its reliability. Bioinformatics analysis showed that circRNA1002-associated genes were enriched in GO terms relating to hormone pathway and cell-cell interaction processes, which are involved in the progression of HCC. Conclusion: Our circRNA analysis of HCC patients and HBV asymptomatic carriers showed that circRNA1002 may be a reliable serum biomarker for HCC. These results could provide an improved assay for the early detection of HCC.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsMicroRNAsBiomarkersGene Expression ProfilingHepatitis B virusHumansReproducibility of ResultsRNA, CircularRNA, MessengerBiomarkersMicroRNAsRNA, CircularRNA, MessengerCircular RNAHepatitis B virusHepatocellular carcinomamRNASerum biomarker

Identifiers

PMID35782101
PMCPMC9248787

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.