Evidence map›Paper›PMID 35781923›Full record

ArticleComputational statistics & data analysis2022

Brain Waves Analysis Via a Non-Parametric Bayesian Mixture of Autoregressive Kernels.

Guilllermo Granados-Garcia, Marc Fiecas, Shahbaba Babak, Norbert J Fortin, Hernando Ombao

Abstract read
In one paragraph

Article in Computational statistics & data analysis, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Guilllermo Granados-GarciaKing Abdullah University of Science and Technology.
Marc FiecasUniversity of Minnesota.
Shahbaba BabakUniversity of California Irvine.
Norbert J FortinUniversity of California Irvine.
Hernando OmbaoKing Abdullah University of Science and Technology.

Funding

Nicotinic enhancement of auditory-cognitive processingR01DC017687 · NIDCD · UNIVERSITY OF CALIFORNIA-IRVINE · PI METHERATE, RAJU · 2019 to 2023
$3.1M
Scalable Bayesian Stochastic Process Models for Neural Data AnalysisR01MH115697 · NIMH · UNIVERSITY OF CALIFORNIA-IRVINE · PI SHAHBABA, BABAK · 2018 to 2022
$1.7M
Dynamic manifold-valued time series model in functional brain imagingR01EB028753 · NIBIB · UNIVERSITY OF WISCONSIN-MADISON · PI CHUNG, MOO K · 2020 to 2022
$942k
NIBIB NIH HHS R01 EB028753NIDCD NIH HHS R01 DC017687NIMH NIH HHS R01 MH115697
6 · The paper itself

Abstract

The standard approach to analyzing brain electrical activity is to examine the spectral density function (SDF) and identify frequency bands, defined a priori, that have the most substantial relative contributions to the overall variance of the signal. However, a limitation of this approach is that the precise frequency and bandwidth of oscillations are not uniform across different cognitive demands. Thus, these bands should not be arbitrarily set in any analysis. To overcome this limitation, the Bayesian mixture auto-regressive decomposition (BMARD) method is proposed, as a data-driven approach that identifies (i) the number of prominent spectral peaks, (ii) the frequency peak locations, and (iii) their corresponding bandwidths (or spread of power around the peaks). Using the BMARD method, the standardized SDF is represented as a Dirichlet process mixture based on a kernel derived from second-order auto-regressive processes which completely characterize the location (peak) and scale (bandwidth) parameters. A Metropolis-Hastings within the Gibbs algorithm is developed for sampling the posterior distribution of the mixture parameters. Simulations demonstrate the robust performance of the proposed method. Finally, the BMARD method is applied to analyze local field potential (LFP) activity from the hippocampus of laboratory rats across different conditions in a non-spatial sequence memory experiment, to identify the most prominent frequency bands and examine the link between specific patterns of brain oscillatory activity and trial-specific cognitive demands.

Indexed as

Bayesian nonparametricsDirichlet Processlocal field potentialsMarkov chain Monte CarloSpectral density estimation

Identifiers

PMID35781923
PMCPMC9246339

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.