Evidence map›Paper›PMID 35781557›Full record

ArticleArchives of virology2022

Classification of new morbillivirus and jeilongvirus sequences from bats sampled in Brazil and Malaysia.

Heather L Wells, Elizabeth Loh, Alessandra Nava, Mónica Romero Solorio, Mei Ho Lee, Jimmy Lee, Jum R A Sukor, Isamara Navarrete-Macias, Eliza Liang, Cadhla Firth and 11 more

Open access · hybridAbstract read
In one paragraph

Article in Archives of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  12. Article
  13. Identification of Viruses inMicroorganisms · 2024
    Article
  14. Article
  15. Article
  16. Corona- and Paramyxoviruses in Bats from Brazil: A Matter of Concern?Animals : an open access journal from MDPI · 2023
    Review
  17. Article
  18. Isolation and Molecular Characterisation of Respirovirus 3 in Wild Boar.Animals : an open access journal from MDPI · 2023
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 10 institutions in 5 countries.

Heather L WellsDepartment of Ecology, Evolution, and Environmental Biology, Columbia University, New York, NY, USA. hlw2124@columbia.edu.
Elizabeth LohEcoHealth Alliance, New York, NY, USA.
Alessandra NavaInstituto Leônidas and Maria Deane, Fiocruz Amazônia, Manaus, Brazil.
Mónica Romero SolorioDepartment of Preventive Veterinary Medicine and Animal Health, School of Veterinary Medicine, University of São Paulo, São Paulo, Brazil.
Mei Ho LeeEcoHealth Alliance, New York, NY, USA.
Jimmy LeeEcoHealth Alliance, New York, NY, USA.
Jum R A SukorSabah Wildlife Department, Kota Kinabalu, Sabah, Malaysia.
Isamara Navarrete-MaciasDepartment of Pathology, Microbiology, and Immunology, School of Veterinary Medicine, University of California Davis, Davis, CA, USA.
Eliza LiangCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.
Cadhla FirthEcoHealth Alliance, New York, NY, USA.
Jonathan H EpsteinEcoHealth Alliance, New York, NY, USA.
Melinda K RostalEcoHealth Alliance, New York, NY, USA.
Carlos Zambrana-TorrelioDepartment of Environmental Science and Policy, George Mason University, Fairfax, VA, USA.
Kris MurraySchool of Public Health, Imperial College London, London, UK.
Peter DaszakEcoHealth Alliance, New York, NY, USA.
Tracey GoldsteinZoological Pathology Program, University of Illinois at Urbana-Champaign, Brookfield, IL, USA.
Jonna A K MazetOne Health Institute and Karen C. Drayer Wildlife Health Center, School of Veterinary Medicine, University of California, Davis, CA, USA.
Benhur LeeIcahn School of Medicine at Mount Sinai, New York, NY, USA.
Tom HughesEcoHealth Alliance, New York, NY, USA.
Edison DurigonInstitute of Biomedical Science, University of São Paulo, São Paulo, Brazil.
Simon J AnthonyDepartment of Pathology, Microbiology, and Immunology, School of Veterinary Medicine, University of California Davis, Davis, CA, USA. sjanthony@ucdavis.edu.ORCID http://orcid.org/0000-0001-9519-2663
EcoHealth Alliance · USHospital Sungai Buloh · MYUniversity of California, Davis · USColumbia University · USUniversidade de São Paulo · BRGeorge Mason University · USIcahn School of Medicine at Mount Sinai · USMRC Unit the Gambia · GMSabah Wildlife Department · MYUniversity of Illinois Urbana-Champaign · US

Funding

International Development Research Centre 106150-001United States Agency for International Development AID-OAA-A-14-00102United States Agency for International Development GHN-A-OO-09-00010-00
6 · The paper itself

Abstract

As part of a broad One Health surveillance effort to detect novel viruses in wildlife and people, we report several paramyxovirus sequences sampled primarily from bats during 2013 and 2014 in Brazil and Malaysia, including seven from which we recovered full-length genomes. Of these, six represent the first full-length paramyxovirid genomes sequenced from the Americas, including two that are the first full-length bat morbillivirus genome sequences published to date. Our findings add to the vast number of viral sequences in public repositories, which have been increasing considerably in recent years due to the rising accessibility of metagenomics. Taxonomic classification of these sequences in the absence of phenotypic data has been a significant challenge, particularly in the subfamily Orthoparamyxovirinae, where the rate of discovery of novel sequences has been substantial. Using pairwise amino acid sequence classification (PAASC), we propose that five of these sequences belong to members of the genus Jeilongvirus and two belong to members of the genus Morbillivirus. We also highlight inconsistencies in the classification of Tupaia virus and Mòjiāng virus using the same demarcation criteria and suggest reclassification of these viruses into new genera. Importantly, this study underscores the critical importance of sequence length in PAASC analysis as well as the importance of biological characteristics such as genome organization in the taxonomic classification of viral sequences.

Indexed as

ChiropteraMorbillivirusVirusesAnimalsBrazilGenome, ViralHumansMalaysiaParamyxoviridaePhylogeny

Identifiers

PMID35781557
PMCPMC9402765
OpenAlexW4283795250

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.