Evidence map›Paper›PMID 35778598›Full record

ArticleScientific reports2022

Classification of antimicrobial mechanism of action using dynamic bacterial morphology imaging.

Xudong Ouyang, Jelmer Hoeksma, Ronnie J M Lubbers, Tjalling K Siersma, Leendert W Hamoen, Jeroen den Hertog

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Sensing of Antibiotic-Bacteria Interactions.Antibiotics (Basel, Switzerland) · 2023
    Review
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xudong OuyangHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, The Netherlands.
Jelmer HoeksmaHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, The Netherlands.
Ronnie J M LubbersHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, The Netherlands.
Tjalling K SiersmaSwammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the Netherlands.
Leendert W HamoenSwammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the Netherlands.
Jeroen den HertogHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, The Netherlands. j.denhertog@hubrecht.eu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antimicrobial resistance is a major threat to human health. Basic knowledge of antimicrobial mechanism of action (MoA) is imperative for patient care and for identification of novel antimicrobials. However, the process of antimicrobial MoA identification is relatively laborious. Here, we developed a simple, quantitative time-lapse fluorescence imaging method, Dynamic Bacterial Morphology Imaging (DBMI), to facilitate this process. It uses a membrane dye and a nucleoid dye to track the morphological changes of single Bacillus subtilis cells in response to antimicrobials for up to 60 min. DBMI of bacterial cells facilitated assignment of the MoAs of 14 distinct, known antimicrobial compounds to the five main classes. We conclude that DBMI is a simple method, which facilitates rapid classification of the MoA of antimicrobials in functionally distinct classes.

Indexed as

Anti-Bacterial AgentsAnti-Infective AgentsBacillus subtilisHumansAnti-Bacterial AgentsAnti-Infective Agents

Identifiers

PMID35778598
PMCPMC9249789

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.