Evidence map›Paper›PMID 35778567›Full record

ArticleActa neuropathologica2022

Aberrant NOVA1 function disrupts alternative splicing in early stages of amyotrophic lateral sclerosis.

Florian Krach, Emily C Wheeler, Martin Regensburger, Tom Boerstler, Holger Wend, Anthony Q Vu, Ruth Wang, Stephanie Reischl, Karsten Boldt, Ranjan Batra and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Acta neuropathologica, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

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  15. Interaction of theCells · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Florian KrachDepartment of Stem Cell Biology, University Hospital Erlangen, Friedrich-Alexander University of Erlangen-Nürnberg (FAU), Erlangen, Germany.
Emily C WheelerDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
Martin RegensburgerDepartment of Stem Cell Biology, University Hospital Erlangen, Friedrich-Alexander University of Erlangen-Nürnberg (FAU), Erlangen, Germany.
Tom BoerstlerDepartment of Stem Cell Biology, University Hospital Erlangen, Friedrich-Alexander University of Erlangen-Nürnberg (FAU), Erlangen, Germany.
Holger WendDepartment of Stem Cell Biology, University Hospital Erlangen, Friedrich-Alexander University of Erlangen-Nürnberg (FAU), Erlangen, Germany.
Anthony Q VuDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
Ruth WangDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
Stephanie ReischlDepartment of Stem Cell Biology, University Hospital Erlangen, Friedrich-Alexander University of Erlangen-Nürnberg (FAU), Erlangen, Germany.
Karsten BoldtCore Facility for Medical Bioanalytics, Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.
Ranjan BatraDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
Stefan AignerDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
John RavitsDepartment of Neurosciences, University of California San Diego, La Jolla, CA, USA.
Juergen WinklerCenter of Rare Diseases Erlangen (ZSEER), University Hospital Erlangen, Friedrich-Alexander University of Erlangen-Nürnberg (FAU), Erlangen, Germany.
Gene W YeoDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
Beate WinnerDepartment of Stem Cell Biology, University Hospital Erlangen, Friedrich-Alexander University of Erlangen-Nürnberg (FAU), Erlangen, Germany. beate.winner@fau.de.ORCID 0000-0002-6909-0564
Friedrich-Alexander-Universität Erlangen-Nürnberg · DEUniversity of California San Diego · USUniversity of Tübingen · DE

Funding

U of Calif, San Diego Neuroscience Microscopy ImagingP30NS047101 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GLEESON, JOSEPH G, ZHENG, BINHAI · 2003 to 2022
$9.0M
Developing ASO Therapy for Repeat Expanded C9orf72 ALS-FTDR01NS088578 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI RAVITS, JOHN · 2014 to 2018
$2.1M
ELAVL3 in ALS/FTDR21NS121805 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI RAVITS, JOHN · 2021 to 2021
$417k
NINDS NIH HHS P30 NS047101NINDS NIH HHS R01 NS088578NINDS NIH HHS R01NS088578NINDS NIH HHS R21 NS121805NINDS NIH HHS R21NS121805
6 · The paper itself

Abstract

Amyotrophic lateral sclerosis (ALS) is a fatal disease characterized by aberrant alternative splicing (AS). Nuclear loss and cytoplasmic accumulation of the splicing factor TDP-43 in motor neurons (MN) are hallmarks of ALS at late stages of the disease. However, it is unknown if altered AS is present before TDP-43 pathology occurs. Here, we investigate altered AS and its origins in early stages of ALS using human induced pluripotent stem cell-derived motor neurons (MNs) from sporadic and familial ALS patients. We find high levels of the RNA-binding proteins NOVA1, NOVA2, and RBFOX2 in the insoluble protein fractions and observe that AS events in ALS-associated MNs are enriched for binding sites of these proteins. Our study points to an early disrupted function of NOVA1 that drives AS changes in a complex fashion, including events caused by a consistent loss of NOVA1 function. NOVA1 exhibits increased cytoplasmic protein levels in early stage MNs without TDP-43 pathology in ALS postmortem tissue. As nuclear TDP-43 protein level depletes, NOVA1 is reduced. Potential indications for a reduction of NOVA1 also came from mice over-expressing TDP-43 lacking its nuclear localization signal and iPSC-MN stressed with puromycin. This study highlights that additional RBP-RNA perturbations in ALS occur in parallel to TDP-43.

Indexed as

Amyotrophic Lateral SclerosisDNA-Binding ProteinsInduced Pluripotent Stem CellsNeuro-Oncological Ventral AntigenAlternative SplicingAnimalsHumansMiceNerve Tissue ProteinsNuclear ProteinsRepressor ProteinsRNA-Binding ProteinsRNA Splicing FactorsDNA-Binding ProteinsNerve Tissue ProteinsNeuro-Oncological Ventral AntigenNOVA1 protein, humanNova1 protein, mouseNOVA2 protein, humanNuclear ProteinsRBFOX2 protein, humanRbfox2 protein, mouseRepressor ProteinsRNA-Binding ProteinsRNA Splicing FactorsTARDBP protein, humanTardbp protein, mouse

Identifiers

PMID35778567
PMCPMC9381448
OpenAlexW4283741487

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.