Evidence map›Paper›PMID 35776209›Full record

ArticleArchives of microbiology2022

Transcriptomic analysis reveals the mechanism of host growth promotion by endophytic fungus of Rumex gmelinii Turcz.

Changhong Ding, Shouyu Wang, Jiabin Li, Zhenyue Wang

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. A fungal endophyte of the medicinal plant,Frontiers in microbiology · 2026
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Changhong DingCollege of Pharmacy, Heilongjiang University of Traditional Chinese Medicine, Harbin, China. 598808726@qq.com.ORCID http://orcid.org/0000-0002-1502-9434
Shouyu WangCollege of Pharmacy, Heilongjiang University of Traditional Chinese Medicine, Harbin, China.
Jiabin LiCollege of Pharmacy, Heilongjiang University of Traditional Chinese Medicine, Harbin, China.
Zhenyue WangCollege of Pharmacy, Heilongjiang University of Traditional Chinese Medicine, Harbin, China.
Heilongjiang University · CNHeilongjiang University of Chinese Medicine · CN

Funding

Heilongjiang Provincial Science and Technology Department C2016053Heilongjiang Provincial Science and Technology Department LH2020H093National Plan for Science, Technology and Innovation 2016yfc50500300
6 · The paper itself

Abstract

Rumex gmelinii Turcz. (RGT) is a medicinal plant of the genus Rumex, family Polygonaceae. Our research group isolated an endophytic fungus, Plectosphaerella cucumerina (Strain J-G) from RGT, which could significantly promote host growth when co-cultured with host seedlings. In this study, we used transcriptome analysis and verification experiments to explore the molecular mechanisms underlying this growth-promoting effect. We found that, during co-culture with Strain J-G, the expression of genes encoding key enzymes in amino acid metabolism and carbohydrate synthesis and metabolism were up-regulated in RGT tissue culture seedlings, providing additional substrate and energy for plant growth. In addition, the expression of genes encoding the responser of RGT seedlings to hormones, including auxin and cytokinin, were significantly enhanced, promoting plant growth and development. Furthermore, RGT seedling defense systems were mobilized by Strain J-G; therefore, more secondary metabolites and substances involved in stress resistance were produced, ensuring normal plant growth and metabolism. The research showed Strain J-G significantly promote the accumulation of biomass and effective components of RGT, which provide basis for its application. This research also provides a reference method for the study of growth-promoting mechanism of endophytic fungi.

Indexed as

RumexFungiGene Expression ProfilingPlant DevelopmentSeedlingsTranscriptomeEndophytic fungusGrowth promotingMechanismRumex gmelinii Turcz. (RGT)Transcriptome

Identifiers

PMID35776209
OpenAlexW4283737796

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.