Evidence map›Paper›PMID 35776071›Full record

ArticleDatabase : the journal of biological databases and curation2022

Continuous development of the semantic search engine preVIEW: from COVID-19 to long COVID.

Lisa Langnickel, Johannes Darms, Katharina Heldt, Denise Ducks, Juliane Fluck

Abstract read
In one paragraph

Article in Database : the journal of biological databases and curation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Lisa LangnickelZB MED - Information Centre for Life Sciences, Gleueler Straβe 60, 50931 Cologne, Germany.ORCID 0000-0002-6356-6760
Johannes DarmsZB MED - Information Centre for Life Sciences, Gleueler Straβe 60, 50931 Cologne, Germany.ORCID 0000-0001-5809-2276
Katharina HeldtRobert Koch Institute, Burgstraβe 37, 38855 Wernigerode, Germany.
Denise DucksRobert Koch Institute, Burgstraβe 37, 38855 Wernigerode, Germany.
Juliane FluckZB MED - Information Centre for Life Sciences, Gleueler Straβe 60, 50931 Cologne, Germany.ORCID 0000-0003-1379-7023

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

preVIEW is a freely available semantic search engine for Coronavirus disease (COVID-19)-related preprint publications. Currently, it contains >43 800 documents indexed with >4000 semantic concepts, annotated automatically. During the last 2 years, the dynamic situation of the corona crisis has demanded dynamic development. Whereas new semantic concepts have been added over time-such as the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of interest-the service has been also extended with several features improving the usability and user friendliness. Most importantly, the user is now able to give feedback on detected semantic concepts, i.e. a user can mark annotations as true positives or false positives. In addition, we expanded our methods to construct search queries. The presented version of preVIEW also includes links to the peer-reviewed journal articles, if available. With the described system, we participated in the BioCreative VII interactive text-mining track and retrieved promising user-in-the-loop feedback. Additionally, as the occurrence of long-term symptoms after an infection with the virus SARS-CoV-2-called long COVID-is getting more and more attention, we have recently developed and incorporated a long COVID classifier based on state-of-the-art methods and manually curated data by experts. The service is freely accessible under https://preview.zbmed.de.

Indexed as

COVID-19Search EngineHumansPost-Acute COVID-19 SyndromeSARS-CoV-2Semantics

Identifiers

PMID35776071
PMCPMC9248388

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.