Evidence map›Paper›PMID 35775972›Full record

ArticleMicrobial genomics2022

ActinoBase: tools and protocols for researchers working on

Morgan Anne Feeney, Jake Terry Newitt, Emily Addington, Lis Algora-Gallardo, Craig Allan, Lucas Balis, Anna S Birke, Laia Castaño-Espriu, Louise K Charkoudian, Rebecca Devine and 34 more

Abstract read
In one paragraph

Article in Microbial genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. The Underexplored GenusMarine drugs · 2026
    Review
  2. Discovery and Biosynthesis of the Novel Glycotetrapeptide Antibiotic Biffamycin A.Angewandte Chemie (International ed. in English) · 2026
    Article
  3. Article
  4. The draft genome sequence ofMicrobiology resource announcements · 2026
    Article
  5. Article
  6. Microbe Profile:Microbiology (Reading, England) · 2025
    Review
  7. Article
  8. Assessing the effect of temperature onMicrobiology (Reading, England) · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Natural Products from Singapore Soil-DerivedMolecules (Basel, Switzerland) · 2023
    Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

44 authors.

Morgan Anne FeeneyUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Jake Terry NewittDepartment of Molecular Microbiology, John Innes Centre, Norwich, NR4 7UH, UK.
Emily AddingtonUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Lis Algora-GallardoUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Craig AllanSwansea University Institute of Life Science, College of Medicine, Swansea, Wales, UK.
Lucas BalisDepartment of Molecular Microbiology, John Innes Centre, Norwich, NR4 7UH, UK.
Anna S BirkeUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Laia Castaño-EspriuUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Louise K CharkoudianHaverford College, Department of Chemistry, USA.
Rebecca DevineDepartment of Molecular Microbiology, John Innes Centre, Norwich, NR4 7UH, UK.
Damien GayrardDepartment of Molecular Microbiology, John Innes Centre, Norwich, NR4 7UH, UK.
Jacob HamiltonDepartment of Molecular Microbiology, John Innes Centre, Norwich, NR4 7UH, UK.
Oliver HennrichLeibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures GmbH Inhoffenstraße 7B, 38124 Braunschweig, Germany.
Paul A HoskissonUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Molly Keith-BakerUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Joshua G KleinHaverford College, Department of Chemistry, USA.
Worarat KruasuwanDivision of Bioinformatics and Data Management for Research, Research Group and Research Network Division, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.
David R MarkUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Yvonne MastLeibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures GmbH Inhoffenstraße 7B, 38124 Braunschweig, Germany.
Rebecca E McHughUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Thomas C McLeanDepartment of Molecular Microbiology, John Innes Centre, Norwich, NR4 7UH, UK.
Elmira MohitUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
John T MunnochUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Jordan MurrayDepartment of Physics, SUPA, University of Strathclyde, Glasgow, G4 0NG, UK.
Katie NobleDepartment of Molecular Microbiology, John Innes Centre, Norwich, NR4 7UH, UK.
Hiroshi OtaniUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Jonathan ParraUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Camila F PereiraDepartment of Insect Symbiosis, Max Planck Institute for Chemical Ecology, Hans-Knöll-Straße 8, 07745 Jena, Germany.
Louisa PerryDepartment of Molecular Microbiology, John Innes Centre, Norwich, NR4 7UH, UK.
Linamaria Pintor-EscobarBiology Department, Edge Hill University, St Helens Road, Ormskirk, L39 4QP, UK.
Leighton PritchardUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Samuel M M PrudenceSchool of Biological and Behavioral Sciences, Queen Mary University of London, Mile End Road, London, E1 4NS, UK.
Alicia H RussellColorifix Ltd, Norwich Research Park, Norwich, UK.
Jana K SchnieteBiology Department, Edge Hill University, St Helens Road, Ormskirk, L39 4QP, UK.
Ryan F SeipkeAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.
Nelly Sélem-MojicaUniversidad Nacional Autónoma de México, Centro de Ciencias Matemáticas, en Morelia, Michoacán, Mexico.
Agustina UndabarrenaDepartamento de Química & Centro de Biotecnología Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Laboratorio de Microbiología Molecular y Biotecnología Ambiental, Valparaíso, 2340000, Chile.
Kristiina VindHost-Microbe Interactomics Group, Wageningen University, 6708 WD Wageningen, The Netherlands.
Gilles P van WezelMicrobial Biotechnology, Institute of Biology, Leiden University, Rapenburg, The Netherlands.
Barrie WilkinsonDepartment of Molecular Microbiology, John Innes Centre, Norwich, NR4 7UH, UK.
Sarah F WorsleySchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK.
Katherine R DuncanUniversity of Strathclyde, Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, G4 0RE, UK.
Lorena T Fernández-MartínezBiology Department, Edge Hill University, St Helens Road, Ormskirk, L39 4QP, UK.
Matthew I HutchingsDepartment of Molecular Microbiology, John Innes Centre, Norwich, NR4 7UH, UK.

Funding

Biotechnology and Biological Sciences Research Council BB/F009429/1Biotechnology and Biological Sciences Research Council BB/M011216/1Biotechnology and Biological Sciences Research Council BB/N023544/1Biotechnology and Biological Sciences Research Council BB/P005292/1Biotechnology and Biological Sciences Research Council BB/R022054/1Biotechnology and Biological Sciences Research Council BB/S00811X/1Biotechnology and Biological Sciences Research Council BB/S016651/1Biotechnology and Biological Sciences Research Council BBS/E/J/000PR9790Biotechnology and Biological Sciences Research Council BB/T001038/1Biotechnology and Biological Sciences Research Council BB/T004126/1Biotechnology and Biological Sciences Research Council BB/T008075/1Biotechnology and Biological Sciences Research Council BB/T014962/1Biotechnology and Biological Sciences Research Council BB/T015446/1Biotechnology and Biological Sciences Research Council BB/V000993/1Biotechnology and Biological Sciences Research Council BB/V017586/1Biotechnology and Biological Sciences Research Council BB/W000628Medical Research Council G0801721
6 · The paper itself

Abstract

Actinobacteria is an ancient phylum of Gram-positive bacteria with a characteristic high GC content to their DNA. The ActinoBase Wiki is focused on the filamentous actinobacteria, such as

Indexed as

ActinobacteriaStreptomycesAnti-Bacterial AgentsAnti-Bacterial AgentsactinobacteriaantibioticsBGCsCRISPRspecialised metabolitesStreptomyces

Identifiers

PMID35775972
PMCPMC9455695

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.