Evidence map›Paper›PMID 35773279›Full record

ArticleNature communications2022

An essential role for tungsten in the ecology and evolution of a previously uncultivated lineage of anaerobic, thermophilic Archaea.

Steffen Buessecker, Marike Palmer, Dengxun Lai, Joshua Dimapilis, Xavier Mayali, Damon Mosier, Jian-Yu Jiao, Daniel R Colman, Lisa M Keller, Emily St John and 20 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
5.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 36 citations in OpenAlex.

  1. Microbial ecology of shallow groundwater ecosystems.Nature reviews. Microbiology · 2026
    Review
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  15. Metabolic versatility ofFrontiers in microbiology · 2023
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 11 institutions in 4 countries.

Steffen Buessecker *Department of Earth System Science, Stanford University, Stanford, CA, USA. sbuessecker@stanford.edu.ORCID http://orcid.org/0000-0002-1376-8049
Marike Palmer *School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, USA. marike.palmer@unlv.edu.ORCID http://orcid.org/0000-0001-8395-8465
Dengxun LaiSchool of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, USA.ORCID http://orcid.org/0000-0001-8761-7844
Joshua DimapilisDepartment of Biology, California State University, San Bernardino, CA, USA.
Xavier MayaliPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.ORCID http://orcid.org/0000-0002-2170-0773
Damon MosierDepartment of Biology, California State University, San Bernardino, CA, USA.ORCID http://orcid.org/0000-0003-1818-6010
Jian-Yu JiaoState Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Resources and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), School of Life Sciences, Sun Yat-Sen University, Guangzhou, PR China.ORCID http://orcid.org/0000-0002-6900-2296
Daniel R ColmanDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.
Lisa M KellerDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.
Emily St JohnDepartment of Biology, Portland State University, Portland, OR, USA.ORCID http://orcid.org/0000-0002-8527-2333
Michelle MirandaDepartment of Biology, California State University, San Bernardino, CA, USA.
Cristina GonzalezDepartment of Biology, California State University, San Bernardino, CA, USA.
Lizett GonzalezDepartment of Biology, California State University, San Bernardino, CA, USA.
Christian SamDepartment of Biology, California State University, San Bernardino, CA, USA.
Christopher VillaDepartment of Biology, California State University, San Bernardino, CA, USA.
Madeline ZhuoDepartment of Biology, California State University, San Bernardino, CA, USA.
Nicholas BodmanDepartment of Biology, California State University, San Bernardino, CA, USA.
Fernando RoblesDepartment of Biology, California State University, San Bernardino, CA, USA.
Eric S BoydDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.
Alysia D CoxDepartment of Chemistry and Geochemistry, Montana Technological University, Butte, MT, USA.ORCID http://orcid.org/0000-0001-9108-143X
Brian St ClairDepartment of Chemistry and Geochemistry, Montana Technological University, Butte, MT, USA.
Zheng-Shuang HuaDepartment of Environmental Science and Engineering, University of Science and Technology of China, Hefei, PR China.ORCID http://orcid.org/0000-0002-2405-4228
Wen-Jun LiState Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Resources and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), School of Life Sciences, Sun Yat-Sen University, Guangzhou, PR China.ORCID http://orcid.org/0000-0002-1233-736X
Anna-Louise ReysenbachDepartment of Biology, Portland State University, Portland, OR, USA.
Matthew B StottSchool of Biological Sciences, University of Canterbury, Christchurch, New Zealand.ORCID http://orcid.org/0000-0002-2082-9460
Peter K WeberPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.ORCID http://orcid.org/0000-0001-6022-6050
Jennifer Pett-RidgePhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.ORCID http://orcid.org/0000-0002-4439-2398
Anne E DekasDepartment of Earth System Science, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0001-9548-8413
Brian P HedlundSchool of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, USA.ORCID http://orcid.org/0000-0001-8530-0448
Jeremy A DodsworthDepartment of Biology, California State University, San Bernardino, CA, USA. JDodsworth@csusb.edu.
California State University, San Bernardino · USLawrence Livermore National Laboratory · USMontana State University · USUniversity of Nevada, Las Vegas · USMontana Technological University · USPortland State University · USSouthern Marine Science and Engineering Guangdong Laboratory (Guangzhou) · CNStanford University · USUniversity of Calgary · CAUniversity of Canterbury · NZUniversity of Science and Technology of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trace metals have been an important ingredient for life throughout Earth's history. Here, we describe the genome-guided cultivation of a member of the elusive archaeal lineage Caldarchaeales (syn. Aigarchaeota), Wolframiiraptor gerlachensis, and its growth dependence on tungsten. A metagenome-assembled genome (MAG) of W. gerlachensis encodes putative tungsten membrane transport systems, as well as pathways for anaerobic oxidation of sugars probably mediated by tungsten-dependent ferredoxin oxidoreductases that are expressed during growth. Catalyzed reporter deposition-fluorescence in-situ hybridization (CARD-FISH) and nanoscale secondary ion mass spectrometry (nanoSIMS) show that W. gerlachensis preferentially assimilates xylose. Phylogenetic analyses of 78 high-quality Wolframiiraptoraceae MAGs from terrestrial and marine hydrothermal systems suggest that tungsten-associated enzymes were present in the last common ancestor of extant Wolframiiraptoraceae. Our observations imply a crucial role for tungsten-dependent metabolism in the origin and evolution of this lineage, and hint at a relic metabolic dependence on this trace metal in early anaerobic thermophiles.

Indexed as

ArchaeaTungstenAnaerobiosisMetagenomePhylogenyTungsten

Identifiers

PMID35773279
PMCPMC9246946
OpenAlexW4283732055

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.