Evidence map›Paper›PMID 35772498›Full record

ArticleThe Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases

Sensitivity of different DNA extraction methods and PCR to detect resistance in patients with leprosy stratified by the bacilloscopic index.

Lais Sevilha-Santos, Danielle Costa Aquino, Günter Hans Neto, Fabiano José Queiroz Costa, Carlos Augusto Felipe de Sousa, Elaine Faria Morelo, Agenor de Castro Moreira Dos Santos Júnior, Ciro Martins Gomes

Open access · goldAbstract read
In one paragraph

Article in The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Lais Sevilha-SantosFaculdade de Medicina, Programa de Pós-graduação em Ciências Médicas, Universidade de Brasília, Brasília, DF, Brazil.
Danielle Costa AquinoFaculdade de Medicina, Programa de Pós-graduação em Ciências Médicas, Universidade de Brasília, Brasília, DF, Brazil.
Günter Hans NetoUniversidade de Brasília, Hospital Universitário de Brasília, Brasília, DF, Brazil.
Fabiano José Queiroz CostaLaboratório Central de Saúde Pública do Distrito Federal, Secretaria de Saúde do Distrito Federal, Brasília, DF, Brazil.
Carlos Augusto Felipe de SousaLaboratório Central de Saúde Pública do Distrito Federal, Secretaria de Saúde do Distrito Federal, Brasília, DF, Brazil.
Elaine Faria MoreloFaculdade de Medicina, Programa de Pós-graduação em Ciências Médicas, Universidade de Brasília, Brasília, DF, Brazil; Laboratório Central de Saúde Pública do Distrito Federal, Secretaria de Saúde do Distrito Federal, Brasília, DF, Brazil.
Agenor de Castro Moreira Dos Santos JúniorLaboratório Central de Saúde Pública do Distrito Federal, Secretaria de Saúde do Distrito Federal, Brasília, DF, Brazil.
Ciro Martins GomesFaculdade de Medicina, Programa de Pós-graduação em Ciências Médicas, Universidade de Brasília, Brasília, DF, Brazil; Universidade de Brasília, Hospital Universitário de Brasília, Brasília, DF, Brazil; Núcleo de Medicina Tropical, Universidade de Brasília, Brasília, DF, Brazil. Electronic address: cirogomes@unb.br.
Universidade de Brasília · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionAntimicrobial resistance in leprosy is an emerging problem, and the quantitative impact of low bacilloscopic indexes (BIs) on the sensitivity of molecular tests is unknown. We aimed to evaluate the sensitivity of gene sequencing for the detection of mutations related to antimicrobial resistance in Mycobacterium leprae in patients with low BIs using an analytical model.

methodsPatients with leprosy were included and divided into two groups depending on their BIs (≥ 2+ and < 2+). The sensitivities of the two DNA extraction methods were compared after amplifying and sequencing the repetitive element (RLEP), folP1, rpoB and gyrA in M. leprae.

resultsWe included 56 patients with leprosy: 35 had BIs less than 2+ (22 had negative slit-skin smear [SSS] results) and 21 patients had BIs greater than or equal to 2+. The sensitivity of the amplification of the RLEP target and the gene sequencing of folP1, rpoB and gyrA was 50 to 70% lower in patients with a BI less than 2+ and was significantly reduced in patients with lower BIs for all targets (p < 0.001). One patient had a mutation in the folP1 gene, and 14 patients had mutations in the gyrA gene, but no mutations related to antimicrobial resistance were found.

conclusionsWe can conclude that the sensitivity of molecular tests is directly related to the BI, but these tests can still detect up to 20% of the targets in patients with BIs < 2+. New strategies to improve the sensitivity for detecting antimicrobial resistance in leprosy patients and reasonable clinical criteria for follow-up and the introduction of alternative treatments must be developed.

Indexed as

Leprostatic AgentsLeprosyBacterial ProteinsDNADNA, BacterialDrug Resistance, BacterialHumansMycobacterium lepraePolymerase Chain ReactionSensitivity and SpecificityBacterial ProteinsDNADNA, BacterialLeprostatic AgentsBacilloscopic indexDNA extractionLeprosyMicrobial sensitivity testsPolymerase chain reactionTherapeutics

Identifiers

PMID35772498
PMCPMC9459058
OpenAlexW4283589890

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.