Evidence map›Paper›PMID 35771136›Full record

ArticleAging2022

Identification of m7G-associated lncRNA prognostic signature for predicting the immune status in cutaneous melanoma.

Jielin Rong, Hui Wang, Yi Yao, Zhengyuan Wu, Leilei Chen, Chaojie Jin, Zhaoyang Shi, Cheng Wu, Xueqing Hu

Open access · hybridAbstract read
In one paragraph

Article in Aging, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 38 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jielin RongDepartment of Hand Plastic Surgery, The First People's Hospital of Linping District, Hangzhou 311199, China.
Hui WangDepartment of Plastic Surgery, The Second Affiliated Hospital of Zhejiang University, Hangzhou 311199, China.
Yi YaoDepartment of Hand Plastic Surgery, The First People's Hospital of Linping District, Hangzhou 311199, China.
Zhengyuan WuDepartment of Hand Plastic Surgery, The First People's Hospital of Linping District, Hangzhou 311199, China.
Leilei ChenDepartment of Hand Plastic Surgery, The First People's Hospital of Linping District, Hangzhou 311199, China.
Chaojie JinDepartment of Hand Plastic Surgery, The First People's Hospital of Linping District, Hangzhou 311199, China.
Zhaoyang ShiDepartment of Hand Plastic Surgery, The First People's Hospital of Linping District, Hangzhou 311199, China.
Cheng WuDepartment of Hand Plastic Surgery, The First People's Hospital of Linping District, Hangzhou 311199, China.
Xueqing HuDepartment of Plastic Surgery, The Second Affiliated Hospital of Zhejiang University, Hangzhou 311199, China.
Hangzhou First People's Hospital · CNSecond Affiliated Hospital of Zhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA modifications, including RNA methylation, are widely existed in cutaneous melanoma (CM). Among epigenetic modifications, N7-methylguanosine (m7G) is a kind of modification at 5' cap of RNA which participate in maintaining the stability of mRNA and various cell biological processes. However, there is still no study concerning the relationship between CM and m7G methylation complexes, METTL1 and WDR4. Here, long non-coding RNA (lncRNAs) and gene expression data of CM from the Cancer Genome Atlas (TCGA) database were retrieved to identify differentially expressed m7G-related lncRNAs connected with overall survival of CM. Then, Cox regression analyses was applied to construct a lncRNA risk signature, the prognostic value of identified signature was further evaluated. As a result, 6 m7G-associated lncRNAs that were significantly related to CM prognosis were incorporated into our prognostic signature. The functional analyses indicated that the prognostic model was correlated with patient survival, cancer metastasis, and growth. Meanwhile, its diagnostic accuracy was better than conventional clinicopathological characteristics. The pathway enrichment analysis showed that the risk model was enriched in several immunity-associated pathways. Moreover, the signature model was significantly connected with the immune subtypes, infiltration of immune cells, immune microenvironment, as well as several m6A-related genes and tumor stem cells. Finally, a nomogram based on the calculated risk score was established. Overall, a risk signature based on 6 m7G-associated lncRNAs was generated which presented predictive value for the prognosis of CM patients and can be further used in the development of novel therapeutic strategies for CM.

Indexed as

MelanomaRNA, Long NoncodingSkin NeoplasmsBiomarkers, TumorCutaneous Malignant MelanomaGene Expression Regulation, NeoplasticGTP-Binding ProteinsHumansKaplan-Meier EstimatePrognosisTumor MicroenvironmentBiomarkers, TumorGTP-Binding ProteinsRNA, Long NoncodingWDR4 protein, humancutaneous melanomagene signatureimmune statuslncRNAm7G

Identifiers

PMID35771136
PMCPMC9271298
OpenAlexW4283755055

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.