Evidence map›Paper›PMID 35768814›Full record

ArticleBMC pulmonary medicine2022

Comprehensive analysis of CXCR family members in lung adenocarcinoma with prognostic values.

Lian-Tao Hu, Wen-Jun Deng, Zhen-Sheng Chu, Luo Sun, Chun-Bin Zhang, Shi-Zhen Lu, Jin-Ru Weng, Qiao-Sheng Ren, Xin-Yu Dong, Wei-Dong Li and 4 more

Open access · goldAbstract read
In one paragraph

Article in BMC pulmonary medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Lian-Tao Hu *Basic Medical College, Jiamusi University, Jiamusi, 154002, Heilongjiang, China.
Wen-Jun Deng *Basic Medical College, Jiamusi University, Jiamusi, 154002, Heilongjiang, China.
Zhen-Sheng ChuBasic Medical College, Jiamusi University, Jiamusi, 154002, Heilongjiang, China.
Luo SunKey Laboratory of Microecology-Immune Regulatory Network and Related Diseases, Jiamusi, 154002, Heilongjiang, China.
Chun-Bin ZhangDepartment of Medical Technology, Collaborative Innovation Center for Translation Medical Testing and Application Technology Zhangzhou, Zhang Zhou Health Vocational College, Zhangzhou, 363000, Fujian Province, China.
Shi-Zhen LuBasic Medical College, Jiamusi University, Jiamusi, 154002, Heilongjiang, China.
Jin-Ru WengKey Laboratory of Microecology-Immune Regulatory Network and Related Diseases, Jiamusi, 154002, Heilongjiang, China.
Qiao-Sheng RenKey Laboratory of Microecology-Immune Regulatory Network and Related Diseases, Jiamusi, 154002, Heilongjiang, China.
Xin-Yu DongBasic Medical College, Jiamusi University, Jiamusi, 154002, Heilongjiang, China.
Wei-Dong LiBasic Medical College, Jiamusi University, Jiamusi, 154002, Heilongjiang, China.
Xue-Bin LiKey Laboratory of Microecology-Immune Regulatory Network and Related Diseases, Jiamusi, 154002, Heilongjiang, China.
Yun-Ting DuDepartment of Laboratory, Cancer Hospital of China Medical University, Shenyang,, Liaoning Province, China.
Yue LiBasic Medical College, Jiamusi University, Jiamusi, 154002, Heilongjiang, China. 208053012@stu.jmsu.edu.cn.
Wei-Qun WangBasic Medical College, Jiamusi University, Jiamusi, 154002, Heilongjiang, China. wangweiqun1974@jmsu.edu.cn.
Jiamusi University · CNFirst Affiliated Hospital of Jiamusi University · CNChina Medical University · CNZhangzhou Vocational and Technical College · CN

Funding

Excellent Innovation Team Construction Project of Basic Scientific Research Business Fee of Provincial Colleges and Universities in Heilongjiang Province grant no. 2019-KYYWF-1334Jiamusi University doctoral Special Research Fund launch project JMSUBZ2019-01Key Projects of Natural Science Foundation of Heilongjiang Province grant no. ZD2019H008Shenyang Science and Technology Plan Project No.19-112-4-092The present study was supported by the National Natural Science Foundation of China grant no. 81272854Young innovative talents training project of regular undergraduate colleges and universities in Heilongjiang Province grant no. UNPYSCT-2020054
6 · The paper itself

Abstract

backgroundThe expression profiles and molecular mechanisms of CXC chemokine receptors (CXCRs) in Lung adenocarcinoma (LUAD) have been extensively explored. However, the comprehensive prognostic values of CXCR members in LUAD have not yet been clearly identified.

methodsMultiple available datasets, including Oncomine datasets, the cancer genome atlas (TCGA), HPA platform, GeneMANIA platform, DAVID platform and the tumor immune estimation resource (TIMER) were used to detect the expression of CXCRs in LUAD, as well as elucidate the significance and value of novel CXCRs-associated genes and signaling pathways in LUAD.

resultsThe mRNA and/or protein expression of CXCR1, CXCR2, CXCR3, CXCR4, CXCR5 and CXCR6 displayed predominantly decreased in LUAD tissues as compared to normal tissues. On the contrary, compared with the normal tissues, the expression of CXCR7 was significantly increased in LUAD tissues. Subsequently, we constructed a network including CXCR family members and their 20 related genes, and the related GO functions assay showed that CXCRs connected with these genes participated in the process of LUAD through several signal pathways including Chemokine signaling pathway, Cytokine-cytokine receptor interaction and Neuroactive ligand-receptor interaction. TCGA and Timer platform revealed that the mRNA expression of CXCR family members was significantly related to individual cancer stages, cancer subtypes, patient's gender and the immune infiltration level. Finally, survival analysis showed that low mRNA expression levels of CXCR2 (HR = 0.661, and Log-rank P = 1.90e-02), CXCR3 (HR = 0.674, and Log-rank P = 1.00e-02), CXCR4 (HR = 0.65, and Log-rank P = 5.01e-03), CXCR5 (HR = 0.608, and Log-rank P = 4.80e-03) and CXCR6 (HR = 0.622, and Log-rank P = 1.85e-03) were significantly associated with shorter overall survival (OS), whereas high CXCR7 mRNA expression (HR = 1.604, and Log-rank P = 4.27e-03) was extremely related with shorter OS in patients.

conclusionOur findings from public databases provided a unique insight into expression characteristics and prognostic values of CXCR members in LUAD, which would be benefit for the understanding of pathogenesis, diagnosis, prognosis prediction and targeted treatment in LUAD.

Indexed as

AdenocarcinomaAdenocarcinoma of LungLung NeoplasmsHumansPrognosisRNA, MessengerRNA, MessengerCXC chemokine receptors (CXCRs)Lung adenocarcinoma (LUAD)Prognostic values

Identifiers

PMID35768814
PMCPMC9245315
OpenAlexW4283689261

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.